| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224131150|ref|XP_002321013.1| |
score: 190 |
e-value: 2e-46 |
Identity: 87.16% |
Span: 327bp (35.9%) |
Frame: -3 |
| predicted protein [Populus trichocarpa] >gi222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa] |
| Match: gi|255564118|ref|XP_002523056.1| |
score: 188 |
e-value: 8e-46 |
Identity: 85.32% |
Span: 327bp (35.9%) |
Frame: -3 |
| DNA mismatch repair protein pms2, putative [Ricinus communis] >gi223537618|gb|EEF39241.1| DNA mismatch repair protein... |
| Match: gi|225437328|ref|XP_002267393.1| |
score: 187 |
e-value: 1e-45 |
Identity: 86.24% |
Span: 327bp (35.9%) |
Frame: -3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270254447|emb|CBI36837.1| |
score: 187 |
e-value: 1e-45 |
Identity: 86.24% |
Span: 327bp (35.9%) |
Frame: -3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|242065626|ref|XP_002454102.1| |
score: 178 |
e-value: 9e-43 |
Identity: 80.73% |
Span: 327bp (35.9%) |
Frame: -3 |
| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor] >gi241933933|gb|EES07078.1| hypothetical protein SORBIDRA... |
| Match: gi|26450625|dbj|BAC42424.1| |
score: 177 |
e-value: 2e-42 |
Identity: 80.73% |
Span: 327bp (35.9%) |
Frame: -3 |
| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana] |
| Match: gi|18411951|ref|NP_567236.1| |
score: 177 |
e-value: 2e-42 |
Identity: 80.73% |
Span: 327bp (35.9%) |
Frame: -3 |
| PMS1 (POSTMEIOTIC SEGREGATION 1); ATP binding / mismatched DNA binding [Arabidopsis thaliana] >gi15617225|gb|AAL01156... |
| Match: gi|3193291|gb|AAC19275.1| |
score: 176 |
e-value: 2e-42 |
Identity: 81.48% |
Span: 324bp (35.6%) |
Frame: -3 |
| T14P8.6 [Arabidopsis thaliana] >gi7269006|emb|CAB80739.1| AT4g02460 [Arabidopsis thaliana] |
| Match: gi|115447025|ref|NP_001047292.1| |
score: 166 |
e-value: 3e-39 |
Identity: 77.06% |
Span: 327bp (35.9%) |
Frame: -3 |
| Os02g0592300 [Oryza sativa (japonica cultivar-group)] >gi50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregati... |
| Match: gi|168067130|ref|XP_001785478.1| |
score: 139 |
e-value: 3e-31 |
Identity: 62.04% |
Span: 324bp (35.6%) |
Frame: -3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162662920|gb|EDQ49719.1| predicted protein [Physcomitrella... |
| Match: gi|193702343|ref|XP_001947410.1| |
score: 132 |
e-value: 4e-29 |
Identity: 59.43% |
Span: 318bp (34.9%) |
Frame: -3 |
| PREDICTED: similar to DNA mismatch repair protein pms2 [Acyrthosiphon pisum] |
| Match: gi|260801098|ref|XP_002595433.1| |
score: 129 |
e-value: 6e-28 |
Identity: 57.55% |
Span: 318bp (34.9%) |
Frame: -3 |
| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae] >gi229280679|gb|EEN51445.1| hypothetical protein BRAFL... |
| Match: gi|255564118|ref|XP_002523056.1| |
score: 129 |
e-value: 5e-28 |
Identity: 87.32% |
Span: 213bp (23.4%) |
Frame: -1 |
| DNA mismatch repair protein pms2, putative [Ricinus communis] >gi223537618|gb|EEF39241.1| DNA mismatch repair protein... |
| Match: gi|270254447|emb|CBI36837.1| |
score: 127 |
e-value: 2e-27 |
Identity: 88.73% |
Span: 213bp (23.4%) |
Frame: -1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224131150|ref|XP_002321013.1| |
score: 127 |
e-value: 2e-27 |
Identity: 82.43% |
Span: 222bp (24.4%) |
Frame: -1 |
| predicted protein [Populus trichocarpa] >gi222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa] |
| Match: gi|225437328|ref|XP_002267393.1| |
score: 127 |
e-value: 2e-27 |
Identity: 88.73% |
Span: 213bp (23.4%) |
Frame: -1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147768838|emb|CAN75888.1| |
score: 125 |
e-value: 9e-27 |
Identity: 87.32% |
Span: 213bp (23.4%) |
Frame: -1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|18411951|ref|NP_567236.1| |
score: 122 |
e-value: 7e-26 |
Identity: 85.71% |
Span: 210bp (23.1%) |
Frame: -1 |
| PMS1 (POSTMEIOTIC SEGREGATION 1); ATP binding / mismatched DNA binding [Arabidopsis thaliana] >gi15617225|gb|AAL01156... |
| Match: gi|3193291|gb|AAC19275.1| |
score: 122 |
e-value: 7e-26 |
Identity: 85.71% |
Span: 210bp (23.1%) |
Frame: -1 |
| T14P8.6 [Arabidopsis thaliana] >gi7269006|emb|CAB80739.1| AT4g02460 [Arabidopsis thaliana] |
| Match: gi|26450625|dbj|BAC42424.1| |
score: 122 |
e-value: 7e-26 |
Identity: 85.71% |
Span: 210bp (23.1%) |
Frame: -1 |
| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana] |
| Match: gi|242065626|ref|XP_002454102.1| |
score: 116 |
e-value: 4e-24 |
Identity: 71.25% |
Span: 240bp (26.3%) |
Frame: -1 |
| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor] >gi241933933|gb|EES07078.1| hypothetical protein SORBIDRA... |
| Match: gi|115447025|ref|NP_001047292.1| |
score: 108 |
e-value: 1e-21 |
Identity: 70.67% |
Span: 225bp (24.7%) |
Frame: -1 |
| Os02g0592300 [Oryza sativa (japonica cultivar-group)] >gi50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregati... |
| Match: gi|168067130|ref|XP_001785478.1| |
score: 100 |
e-value: 3e-19 |
Identity: 68.12% |
Span: 207bp (22.7%) |
Frame: -1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162662920|gb|EDQ49719.1| predicted protein [Physcomitrella... |
| Match: gi|193702343|ref|XP_001947410.1| |
score: 93.6 |
e-value: 3e-17 |
Identity: 61.43% |
Span: 210bp (23.1%) |
Frame: -1 |
| PREDICTED: similar to DNA mismatch repair protein pms2 [Acyrthosiphon pisum] |
| Match: gi|260801098|ref|XP_002595433.1| |
score: 90.9 |
e-value: 2e-16 |
Identity: 61.19% |
Span: 201bp (22.1%) |
Frame: -1 |
| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae] >gi229280679|gb|EEN51445.1| hypothetical protein BRAFL... |
|
| 385 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4G02460.1 |
score: 177 |
e-value: 1e-44 |
Identity: 80.73% |
Span: 327bp (35.9%) |
Frame: -3 |
| DNA mismatch repair protein, putative | chr4:1076306-1080510 REVERSE |
| Match: At4G02460.1 |
score: 122 |
e-value: 4e-28 |
Identity: 85.71% |
Span: 210bp (23.1%) |
Frame: -1 |
| DNA mismatch repair protein, putative | chr4:1076306-1080510 REVERSE |
| Match: At4G09140.1 |
score: 64.7 |
e-value: 7e-11 |
Identity: 34.86% |
Span: 324bp (35.6%) |
Frame: -3 |
| Symbols: MLH1, ATMLH1 | ATMLH1 (Arabidopsis thaliana MutL-homologue 1) | chr4:5817104-5821032 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P54278 |
score: 122 |
e-value: 3e-27 |
Identity: 55.14% |
Span: 321bp (35.2%) |
Frame: -3 |
| Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=1 |
| Match: P54279 |
score: 120 |
e-value: 2e-26 |
Identity: 55.66% |
Span: 318bp (34.9%) |
Frame: -3 |
| Mismatch repair endonuclease PMS2 OS=Mus musculus GN=Pms2 PE=1 SV=1 |
| Match: Q54QA0 |
score: 118 |
e-value: 6e-26 |
Identity: 52.83% |
Span: 318bp (34.9%) |
Frame: -3 |
| Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum GN=pms1 PE=3 SV=1 |
| Match: O95744 |
score: 108 |
e-value: 7e-23 |
Identity: 54.64% |
Span: 291bp (31.9%) |
Frame: -3 |
| Postmeiotic segregation increased 2-like protein 2 OS=Homo sapiens GN=PMS2L2 PE=2 SV=1 |
| Match: A4D2B8 |
score: 107 |
e-value: 1e-22 |
Identity: 54.08% |
Span: 294bp (32.3%) |
Frame: -3 |
| Postmeiotic segregation increased 2-like protein 1 OS=Homo sapiens GN=PMS2L1 PE=2 SV=1 |
| Match: A4D2C0 |
score: 107 |
e-value: 1e-22 |
Identity: 54.08% |
Span: 294bp (32.3%) |
Frame: -3 |
| Postmeiotic segregation increased 4-like protein OS=Homo sapiens GN=PMS4L PE=3 SV=1 |
| Match: Q13400 |
score: 105 |
e-value: 3e-22 |
Identity: 54.17% |
Span: 288bp (31.6%) |
Frame: -3 |
| Postmeiotic segregation increased 2-like protein 8 OS=Homo sapiens GN=PMS2L8 PE=3 SV=1 |
| Match: P0C857 |
score: 105 |
e-value: 4e-22 |
Identity: 53.61% |
Span: 291bp (31.9%) |
Frame: -3 |
| Putative postmeiotic segregation increased 2-like protein 12 OS=Homo sapiens GN=PMS2L12 PE=5 SV=1 |
| Match: P54280 |
score: 104 |
e-value: 1e-21 |
Identity: 50% |
Span: 327bp (35.9%) |
Frame: -3 |
| DNA mismatch repair protein pms1 OS=Schizosaccharomyces pombe GN=pms1 PE=2 SV=1 |
| Match: P54278 |
score: 94.4 |
e-value: 1e-18 |
Identity: 64.18% |
Span: 201bp (22.1%) |
Frame: -1 |
| Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=1 |
| Match: P14242 |
score: 94 |
e-value: 1e-18 |
Identity: 44.44% |
Span: 324bp (35.6%) |
Frame: -3 |
| DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae GN=PMS1 PE=1 SV=3 |
| Match: Q54QA0 |
score: 92.4 |
e-value: 4e-18 |
Identity: 65.15% |
Span: 198bp (21.7%) |
Frame: -1 |
| Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum GN=pms1 PE=3 SV=1 |
| Match: P54279 |
score: 91.7 |
e-value: 6e-18 |
Identity: 62.69% |
Span: 201bp (22.1%) |
Frame: -1 |
| Mismatch repair endonuclease PMS2 OS=Mus musculus GN=Pms2 PE=1 SV=1 |
| Match: P54280 |
score: 89.7 |
e-value: 2e-17 |
Identity: 59.42% |
Span: 207bp (22.7%) |
Frame: -1 |
| DNA mismatch repair protein pms1 OS=Schizosaccharomyces pombe GN=pms1 PE=2 SV=1 |
| Match: A4D2B8 |
score: 87.8 |
e-value: 9e-17 |
Identity: 48.48% |
Span: 273bp (30.0%) |
Frame: -1 |
| Postmeiotic segregation increased 2-like protein 1 OS=Homo sapiens GN=PMS2L1 PE=2 SV=1 |
| Match: O95744 |
score: 87.4 |
e-value: 1e-16 |
Identity: 48.28% |
Span: 243bp (26.7%) |
Frame: -1 |
| Postmeiotic segregation increased 2-like protein 2 OS=Homo sapiens GN=PMS2L2 PE=2 SV=1 |
| Match: A4D2C0 |
score: 87 |
e-value: 2e-16 |
Identity: 54.05% |
Span: 222bp (24.4%) |
Frame: -1 |
| Postmeiotic segregation increased 4-like protein OS=Homo sapiens GN=PMS4L PE=3 SV=1 |
| Match: Q13400 |
score: 81.3 |
e-value: 9e-15 |
Identity: 46% |
Span: 273bp (30.0%) |
Frame: -1 |
| Postmeiotic segregation increased 2-like protein 8 OS=Homo sapiens GN=PMS2L8 PE=3 SV=1 |
| Match: P14242 |
score: 79.7 |
e-value: 3e-14 |
Identity: 61.19% |
Span: 201bp (22.1%) |
Frame: -1 |
| DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae GN=PMS1 PE=1 SV=3 |
| Match: B1KSA2 |
score: 57.8 |
e-value: 2e-18 |
Identity: 27.42% |
Span: 372bp (40.8%) |
Frame: -3 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=mutL PE=3 SV=1 |
| Match: A7GE44 |
score: 57.8 |
e-value: 2e-18 |
Identity: 27.42% |
Span: 372bp (40.8%) |
Frame: -3 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=mutL PE=3 SV=1 |
| Match: B1IM67 |
score: 57.8 |
e-value: 2e-18 |
Identity: 27.42% |
Span: 372bp (40.8%) |
Frame: -3 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Okra / Type B1) GN=mutL PE=3 SV=1 |
| Match: A7GE44 |
score: 55.1 |
e-value: 2e-18 |
Identity: 48.28% |
Span: 174bp (19.1%) |
Frame: -1 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=mutL PE=3 SV=1 |
| Match: B1KSA2 |
score: 55.1 |
e-value: 2e-18 |
Identity: 48.28% |
Span: 174bp (19.1%) |
Frame: -1 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=mutL PE=3 SV=1 |
| Match: B1IM67 |
score: 55.1 |
e-value: 2e-18 |
Identity: 48.28% |
Span: 174bp (19.1%) |
Frame: -1 |
| DNA mismatch repair protein mutL OS=Clostridium botulinum (strain Okra / Type B1) GN=mutL PE=3 SV=1 |
|
| 42 lower scoring hits censored -- only 25 best hits are stored. |
