| genbank/nr [blastx] | Showing best 43 hits recorded |
| Match: gi|157355205|emb|CAO48581.1| |
score: 151 |
e-value: 8e-35 |
Identity: 44.35% |
Span: 699bp (76.1%) |
Frame: 2 |
| unnamed |
| Match: gi|147804944|emb|CAN62612.1| |
score: 149 |
e-value: 4e-34 |
Identity: 42.11% |
Span: 684bp (74.5%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15223304|ref|NP_174556.1| |
score: 145 |
e-value: 6e-33 |
Identity: 58.14% |
Span: 375bp (40.8%) |
Frame: 2 |
| RNA-binding protein, putative [Arabidopsis thaliana] >gi6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thali... |
| Match: gi|79319100|ref|NP_001031131.1| |
score: 145 |
e-value: 6e-33 |
Identity: 58.14% |
Span: 375bp (40.8%) |
Frame: 2 |
| CID11; |
| Match: gi|15235177|ref|NP_192799.1| |
score: 133 |
e-value: 2e-29 |
Identity: 57.25% |
Span: 375bp (40.8%) |
Frame: 2 |
| CID12; RNA binding [Arabidopsis thaliana] >gi4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pf... |
| Match: gi|79325059|ref|NP_001031614.1| |
score: 133 |
e-value: 2e-29 |
Identity: 57.25% |
Span: 375bp (40.8%) |
Frame: 2 |
| RBP37 |
| Match: gi|195636508|gb|ACG37722.1| |
score: 132 |
e-value: 3e-29 |
Identity: 52.35% |
Span: 372bp (40.5%) |
Frame: 2 |
| CID11 |
| Match: gi|15229132|ref|NP_190508.1| |
score: 131 |
e-value: 9e-29 |
Identity: 38.52% |
Span: 699bp (76.1%) |
Frame: 2 |
| gi|15229132|ref|NP_190508.1| RNA-binding protein, putative [Arabidopsis thaliana] gi|11358815|pir||T45844 RNA-binding... |
| Match: gi|110737686|dbj|BAF00782.1| |
score: 131 |
e-value: 9e-29 |
Identity: 38.52% |
Span: 699bp (76.1%) |
Frame: 2 |
| RNA-binding |
| Match: gi|1174153|gb|AAA86641.1| |
score: 129 |
e-value: 3e-28 |
Identity: 56.49% |
Span: 375bp (40.8%) |
Frame: 2 |
| RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|50725622|dbj|BAD33089.1| |
score: 127 |
e-value: 2e-27 |
Identity: 55.38% |
Span: 372bp (40.5%) |
Frame: 2 |
| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] >gi182375457|dbj|BAG24017.1| RNA-binding protein [Or... |
| Match: gi|218200388|gb|EEC82815.1| |
score: 122 |
e-value: 4e-26 |
Identity: 56% |
Span: 372bp (40.5%) |
Frame: 2 |
| hypothetical protein OsI_27601 [Oryza sativa Indica Group] |
| Match: gi|168046548|ref|XP_001775735.1| |
score: 122 |
e-value: 4e-26 |
Identity: 53.28% |
Span: 363bp (39.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162672887|gb|EDQ59418.1| predicted protein [Physcomitrella... |
| Match: gi|115445273|ref|NP_001046416.1| |
score: 118 |
e-value: 8e-25 |
Identity: 44.74% |
Span: 375bp (40.8%) |
Frame: 2 |
| Os02g0244600 |
| Match: gi|116781618|gb|ABK22180.1| |
score: 116 |
e-value: 3e-24 |
Identity: 48.8% |
Span: 375bp (40.8%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|125581461|gb|EAZ22392.1| |
score: 114 |
e-value: 1e-23 |
Identity: 45.27% |
Span: 363bp (39.5%) |
Frame: 2 |
| hypothetical |
| Match: gi|115435208|ref|NP_001042362.1| |
score: 112 |
e-value: 4e-23 |
Identity: 49.26% |
Span: 375bp (40.8%) |
Frame: 2 |
| Os01g0209400 [Oryza sativa (japonica cultivar-group)] >gi56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sa... |
| Match: gi|157357096|emb|CAO63584.1| |
score: 108 |
e-value: 5e-22 |
Identity: 54.24% |
Span: 348bp (37.9%) |
Frame: 2 |
| unnamed |
| Match: gi|218190389|gb|EEC72816.1| |
score: 108 |
e-value: 8e-22 |
Identity: 45.99% |
Span: 342bp (37.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|125569477|gb|EAZ10992.1| |
score: 107 |
e-value: 2e-21 |
Identity: 46.48% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|218187722|gb|EEC70149.1| |
score: 107 |
e-value: 2e-21 |
Identity: 46.48% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical protein OsI_00850 [Oryza sativa Indica Group] |
| Match: gi|212274583|ref|NP_001130716.1| |
score: 107 |
e-value: 1e-21 |
Identity: 41.32% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|194706550|gb|ACF87359.1| |
score: 107 |
e-value: 1e-21 |
Identity: 47.1% |
Span: 375bp (40.8%) |
Frame: 2 |
| unknown |
| Match: gi|15220902|ref|NP_175769.1| |
score: 106 |
e-value: 3e-21 |
Identity: 52.76% |
Span: 366bp (39.9%) |
Frame: 2 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] >gi12324022|gb|AAG51971.1|AC024... |
| Match: gi|218198344|gb|EEC80771.1| |
score: 104 |
e-value: 1e-20 |
Identity: 40.88% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|79319864|ref|NP_001031182.1| |
score: 104 |
e-value: 1e-20 |
Identity: 50.39% |
Span: 366bp (39.9%) |
Frame: 2 |
| CID8 (CTC-INTERACTING DOMAIN 8); RNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|51969708|dbj|BAD43546.1| |
score: 104 |
e-value: 1e-20 |
Identity: 50.39% |
Span: 366bp (39.9%) |
Frame: 2 |
| putative RNA-binding protein [Arabidopsis thaliana] >gi51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabido... |
| Match: gi|195624680|gb|ACG34170.1| |
score: 103 |
e-value: 2e-20 |
Identity: 48.15% |
Span: 375bp (40.8%) |
Frame: 2 |
| CID11 |
| Match: gi|15231858|ref|NP_188063.1| |
score: 103 |
e-value: 2e-20 |
Identity: 47.45% |
Span: 366bp (39.9%) |
Frame: 2 |
| CID9 (CTC-Interacting Domain 9); RNA binding / protein binding [Arabidopsis thaliana] >gi11994215|dbj|BAB01337.1| unn... |
| Match: gi|15238531|ref|NP_197832.1| |
score: 102 |
e-value: 4e-20 |
Identity: 49.58% |
Span: 357bp (38.9%) |
Frame: 2 |
| gi|15238531|ref|NP_197832.1| RNA-binding protein, putative [Arabidopsis thaliana] gi|9758532|dbj|BAB08927.1| RNA-bind... |
| Match: gi|8671859|gb|AAF78422.1|AC018748_1 |
score: 102 |
e-value: 3e-20 |
Identity: 54.17% |
Span: 345bp (37.6%) |
Frame: 2 |
| Contains similarity to RNA-binding protein from Arabidopsis thaliana gi2129727 and contains RNA recognition PF|00076 ... |
| Match: gi|168022364|ref|XP_001763710.1| |
score: 100 |
e-value: 2e-19 |
Identity: 79.03% |
Span: 183bp (19.9%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162685203|gb|EDQ71600.1| predicted protein [Physcomitrella... |
| Match: gi|195626410|gb|ACG35035.1| |
score: 99.4 |
e-value: 4e-19 |
Identity: 39.16% |
Span: 375bp (40.8%) |
Frame: 2 |
| CID11 |
| Match: gi|212274823|ref|NP_001130545.1| |
score: 98.6 |
e-value: 6e-19 |
Identity: 38.69% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|125597492|gb|EAZ37272.1| |
score: 95.9 |
e-value: 4e-18 |
Identity: 38.24% |
Span: 375bp (40.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|115474513|ref|NP_001060853.1| |
score: 93.6 |
e-value: 2e-17 |
Identity: 79.63% |
Span: 162bp (17.6%) |
Frame: 2 |
| Os08g0116400 [Oryza sativa (japonica cultivar-group)] >gi113622822|dbj|BAF22767.1| Os08g0116400 [Oryza sativa Japonic... |
| Match: gi|14030687|gb|AAK53018.1|AF375434_1 |
score: 92 |
e-value: 6e-17 |
Identity: 87.76% |
Span: 147bp (16.0%) |
Frame: 2 |
| At1g32790 [Arabidopsis thaliana] >gi25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana] |
| Match: gi|147818437|emb|CAN60729.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 70.49% |
Span: 183bp (19.9%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157356703|emb|CAO62898.1| |
score: 90.9 |
e-value: 1e-16 |
Identity: 83.67% |
Span: 147bp (16.0%) |
Frame: 2 |
| unnamed |
| Match: gi|50725623|dbj|BAD33090.1| |
score: 87 |
e-value: 2e-15 |
Identity: 81.63% |
Span: 147bp (16.0%) |
Frame: 2 |
| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] |
| Match: gi|125601987|gb|EAZ41312.1| |
score: 83.2 |
e-value: 3e-14 |
Identity: 49.06% |
Span: 300bp (32.7%) |
Frame: 2 |
| hypothetical |
| Match: gi|147803358|emb|CAN68836.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 84.09% |
Span: 132bp (14.4%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|62867578|emb|CAI84654.1| |
score: 73.9 |
e-value: 2e-11 |
Identity: 75.51% |
Span: 147bp (16.0%) |
Frame: 2 |
| hypothetical protein [Nicotiana tabacum] |
|
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At1G32790.1 |
score: 145 |
e-value: 4e-35 |
Identity: 58.14% |
Span: 375bp (40.8%) |
Frame: 2 |
| Symbols: CID11 | CID11; RNA binding / protein binding | chr1:11875154-11877168 REVERSE |
| Match: At1G32790.2 |
score: 145 |
e-value: 4e-35 |
Identity: 58.14% |
Span: 375bp (40.8%) |
Frame: 2 |
| Symbols: CID11 | CID11; RNA binding | chr1:11875008-11877168 REVERSE |
| Match: At4G10610.1 |
score: 133 |
e-value: 2e-31 |
Identity: 57.25% |
Span: 375bp (40.8%) |
Frame: 2 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559139 FORWARD |
| Match: At4G10610.2 |
score: 133 |
e-value: 2e-31 |
Identity: 57.25% |
Span: 375bp (40.8%) |
Frame: 2 |
| Symbols: CID12, ATRBP37, RBP37 | RBP37 (RNA-BINDING PROTEIN 37); RNA binding | chr4:6557332-6559015 FORWARD |
| Match: At3G49390.2 |
score: 131 |
e-value: 7e-31 |
Identity: 38.52% |
Span: 699bp (76.1%) |
Frame: 2 |
| Symbols: CID10 | CID10; RNA binding | chr3:18325886-18328643 REVERSE |
| Match: At3G49390.1 |
score: 131 |
e-value: 7e-31 |
Identity: 38.52% |
Span: 699bp (76.1%) |
Frame: 2 |
| Symbols: CID10 | CID10; RNA binding / protein binding | chr3:18325886-18328643 REVERSE |
| Match: At1G53650.1 |
score: 106 |
e-value: 2e-23 |
Identity: 52.76% |
Span: 366bp (39.9%) |
Frame: 2 |
| Symbols: CID8 | CID8; RNA binding / protein binding | chr1:20032930-20034911 REVERSE |
| Match: At1G53650.2 |
score: 104 |
e-value: 9e-23 |
Identity: 50.39% |
Span: 366bp (39.9%) |
Frame: 2 |
| Symbols: CID8 | CID8; RNA binding | chr1:20032930-20034911 REVERSE |
| Match: At3G14450.1 |
score: 103 |
e-value: 1e-22 |
Identity: 47.45% |
Span: 366bp (39.9%) |
Frame: 2 |
| Symbols: CID9 | CID9 (CTC-Interacting Domain 9); RNA binding / protein binding | chr3:4849795-4851608 FORWARD |
| Match: At5G24440.1 |
score: 102 |
e-value: 3e-22 |
Identity: 49.58% |
Span: 357bp (38.9%) |
Frame: 2 |
| Symbols: CID13 | CID13 (CTC-Interacting Domain 13); RNA binding | chr5:8345405-8347779 REVERSE |
|
| swissprot [blastx] | Showing best 0 hits recorded |
|
