| arabidopsis/peptide [blastx] | Showing best 51 hits recorded |
| Match: At2G29140.1 |
score: 282 |
e-value: 2e-76 |
Identity: 85.8% |
Span: 486bp (51.8%) |
Frame: 2 |
| Symbols: APUM3 | APUM3 (ARABIDOPSIS PUMILIO 3); RNA binding | chr2:12538469-12542137 FORWARD |
| Match: At2G29190.1 |
score: 280 |
e-value: 7e-76 |
Identity: 83.95% |
Span: 486bp (51.8%) |
Frame: 2 |
| Symbols: APUM2 | APUM2 (ARABIDOPSIS PUMILIO 2); RNA binding | chr2:12551337-12555148 REVERSE |
| Match: At2G29200.1 |
score: 279 |
e-value: 2e-75 |
Identity: 83.95% |
Span: 486bp (51.8%) |
Frame: 2 |
| Symbols: APUM1 | APUM1 (ARABIDOPSIS PUMILIO 1); RNA binding | chr2:12556560-12560262 REVERSE |
| Match: At3G10360.1 |
score: 265 |
e-value: 3e-71 |
Identity: 75.74% |
Span: 507bp (54.1%) |
Frame: 2 |
| Symbols: APUM4 | APUM4 (ARABIDOPSIS PUMILIO 4); RNA binding | chr3:3211281-3215149 REVERSE |
| Match: At3G20250.1 |
score: 194 |
e-value: 6e-50 |
Identity: 60.78% |
Span: 459bp (48.9%) |
Frame: 2 |
| Symbols: APUM5 | APUM5 (ARABIDOPSIS PUMILIO 5); RNA binding | chr3:7059104-7062666 REVERSE |
| Match: At4G25880.1 |
score: 166 |
e-value: 2e-41 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At4G25880.3 |
score: 166 |
e-value: 2e-41 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159079 FORWARD |
| Match: At4G25880.2 |
score: 166 |
e-value: 2e-41 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At5G56510.1 |
score: 86.3 |
e-value: 2e-17 |
Identity: 32.39% |
Span: 426bp (45.4%) |
Frame: 2 |
| Symbols: APUM12 | APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding | chr5:22898947-22901068 FORWARD |
| Match: At4G25880.1 |
score: 85.9 |
e-value: 3e-17 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At4G25880.2 |
score: 85.9 |
e-value: 3e-17 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At4G25880.3 |
score: 85.9 |
e-value: 3e-17 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159079 FORWARD |
| Match: At3G20250.1 |
score: 84.7 |
e-value: 7e-17 |
Identity: 28% |
Span: 450bp (48.0%) |
Frame: 2 |
| Symbols: APUM5 | APUM5 (ARABIDOPSIS PUMILIO 5); RNA binding | chr3:7059104-7062666 REVERSE |
| Match: At2G29200.1 |
score: 81.3 |
e-value: 8e-16 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| Symbols: APUM1 | APUM1 (ARABIDOPSIS PUMILIO 1); RNA binding | chr2:12556560-12560262 REVERSE |
| Match: At2G29140.1 |
score: 79.7 |
e-value: 2e-15 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| Symbols: APUM3 | APUM3 (ARABIDOPSIS PUMILIO 3); RNA binding | chr2:12538469-12542137 FORWARD |
| Match: At2G29190.1 |
score: 78.2 |
e-value: 7e-15 |
Identity: 27.78% |
Span: 432bp (46.1%) |
Frame: 2 |
| Symbols: APUM2 | APUM2 (ARABIDOPSIS PUMILIO 2); RNA binding | chr2:12551337-12555148 REVERSE |
| Match: At1G78160.1 |
score: 77.4 |
e-value: 1e-14 |
Identity: 35.56% |
Span: 405bp (43.2%) |
Frame: 2 |
| Symbols: APUM7 | APUM7 (ARABIDOPSIS PUMILIO 7); RNA binding | chr1:29412793-29415077 FORWARD |
| Match: At1G22240.1 |
score: 76.6 |
e-value: 2e-14 |
Identity: 34.06% |
Span: 414bp (44.1%) |
Frame: 2 |
| Symbols: APUM8 | APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding | chr1:7853073-7854952 FORWARD |
| Match: At4G08840.1 |
score: 76.3 |
e-value: 3e-14 |
Identity: 37.61% |
Span: 327bp (34.9%) |
Frame: 2 |
| Symbols: APUM11 | APUM11 (ARABIDOPSIS PUMILIO 11); RNA binding | chr4:5631295-5633609 FORWARD |
| Match: At3G10360.1 |
score: 75.9 |
e-value: 3e-14 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| Symbols: APUM4 | APUM4 (ARABIDOPSIS PUMILIO 4); RNA binding | chr3:3211281-3215149 REVERSE |
| Match: At3G20250.1 |
score: 67 |
e-value: 2e-11 |
Identity: 27.61% |
Span: 480bp (51.2%) |
Frame: 2 |
| Symbols: APUM5 | APUM5 (ARABIDOPSIS PUMILIO 5); RNA binding | chr3:7059104-7062666 REVERSE |
| Match: At1G35730.1 |
score: 61.6 |
e-value: 6e-10 |
Identity: 27.34% |
Span: 405bp (43.2%) |
Frame: 2 |
| Symbols: APUM9 | APUM9 (ARABIDOPSIS PUMILIO 9); RNA binding | chr1:13228536-13231008 REVERSE |
| Match: At1G35750.1 |
score: 60.8 |
e-value: 1e-09 |
Identity: 27.41% |
Span: 405bp (43.2%) |
Frame: 2 |
| Symbols: APUM10 | APUM10 (ARABIDOPSIS PUMILIO 10); RNA binding | chr1:13254610-13256782 REVERSE |
| Match: At1G35730.1 |
score: 60.5 |
e-value: 1e-09 |
Identity: 28.08% |
Span: 429bp (45.7%) |
Frame: 2 |
| Symbols: APUM9 | APUM9 (ARABIDOPSIS PUMILIO 9); RNA binding | chr1:13228536-13231008 REVERSE |
| Match: At5G60180.1 |
score: 58.5 |
e-value: 5e-09 |
Identity: 26.21% |
Span: 426bp (45.4%) |
Frame: 2 |
| AT5G60180.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains Pfam profile: PF00806: Pumil... |
| Match: At5G43090.1 |
score: 58.5 |
e-value: 5e-09 |
Identity: 22% |
Span: 450bp (48.0%) |
Frame: 2 |
| AT5G43090.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains similarity to RNA-binding pr... |
| Match: At5G59280.1 |
score: 58.5 |
e-value: 5e-09 |
Identity: 30.17% |
Span: 348bp (37.1%) |
Frame: 2 |
| Symbols: APUM16 | APUM16 (ARABIDOPSIS PUMILIO 16); RNA binding | chr5:23931367-23932365 REVERSE |
| Match: At1G35850.1 |
score: 57 |
e-value: 2e-08 |
Identity: 27.39% |
Span: 471bp (50.2%) |
Frame: 2 |
| AT1G35850.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains Pfam profile: PF00806: Pumil... |
| Match: At1G21620.1 |
score: 56.6 |
e-value: 2e-08 |
Identity: 26.47% |
Span: 393bp (41.9%) |
Frame: 2 |
| AT1G21620.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains Pfam profile: PF00806: Pumil... |
| Match: At5G09610.1 |
score: 55.8 |
e-value: 4e-08 |
Identity: 28.57% |
Span: 357bp (38.1%) |
Frame: 2 |
| AT5G09610.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains Pfam profile: PF00806: Pumil... |
| Match: At5G60110.1 |
score: 55.5 |
e-value: 5e-08 |
Identity: 28.93% |
Span: 363bp (38.7%) |
Frame: 2 |
| AT5G60110.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains Pfam profile: PF00806: Pumil... |
| Match: At4G25880.1 |
score: 54.7 |
e-value: 8e-08 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At4G25880.2 |
score: 54.7 |
e-value: 8e-08 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159087 FORWARD |
| Match: At4G25880.3 |
score: 54.7 |
e-value: 8e-08 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| Symbols: APUM6 | APUM6 (ARABIDOPSIS PUMILIO 6); RNA binding | chr4:13155527-13159079 FORWARD |
| Match: At4G08840.1 |
score: 53.9 |
e-value: 1e-07 |
Identity: 32.93% |
Span: 237bp (25.3%) |
Frame: 2 |
| Symbols: APUM11 | APUM11 (ARABIDOPSIS PUMILIO 11); RNA binding | chr4:5631295-5633609 FORWARD |
| Match: At1G22240.1 |
score: 53.9 |
e-value: 1e-07 |
Identity: 24.29% |
Span: 420bp (44.8%) |
Frame: 2 |
| Symbols: APUM8 | APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding | chr1:7853073-7854952 FORWARD |
| Match: At5G43110.1 |
score: 52.8 |
e-value: 3e-07 |
Identity: 21.23% |
Span: 438bp (46.7%) |
Frame: 2 |
| AT5G43110.1 | Symbol: None | pumilio/Puf RNA-binding domain-containing protein, contains similarity to RNA-binding pr... |
| Match: At1G22240.1 |
score: 52.4 |
e-value: 4e-07 |
Identity: 23.35% |
Span: 465bp (49.6%) |
Frame: 2 |
| Symbols: APUM8 | APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding | chr1:7853073-7854952 FORWARD |
| Match: At1G35730.1 |
score: 52 |
e-value: 5e-07 |
Identity: 25% |
Span: 351bp (37.4%) |
Frame: 2 |
| Symbols: APUM9 | APUM9 (ARABIDOPSIS PUMILIO 9); RNA binding | chr1:13228536-13231008 REVERSE |
| Match: At2G29190.1 |
score: 51.6 |
e-value: 7e-07 |
Identity: 20.37% |
Span: 483bp (51.5%) |
Frame: 2 |
| Symbols: APUM2 | APUM2 (ARABIDOPSIS PUMILIO 2); RNA binding | chr2:12551337-12555148 REVERSE |
| Match: At1G78160.1 |
score: 51.6 |
e-value: 7e-07 |
Identity: 23.67% |
Span: 465bp (49.6%) |
Frame: 2 |
| Symbols: APUM7 | APUM7 (ARABIDOPSIS PUMILIO 7); RNA binding | chr1:29412793-29415077 FORWARD |
| Match: At3G10360.1 |
score: 48.9 |
e-value: 4e-06 |
Identity: 22.83% |
Span: 378bp (40.3%) |
Frame: 2 |
| Symbols: APUM4 | APUM4 (ARABIDOPSIS PUMILIO 4); RNA binding | chr3:3211281-3215149 REVERSE |
| Match: At5G56510.1 |
score: 48.1 |
e-value: 7e-06 |
Identity: 22.88% |
Span: 459bp (48.9%) |
Frame: 2 |
| Symbols: APUM12 | APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding | chr5:22898947-22901068 FORWARD |
| Match: At2G29200.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 20.37% |
Span: 483bp (51.5%) |
Frame: 2 |
| Symbols: APUM1 | APUM1 (ARABIDOPSIS PUMILIO 1); RNA binding | chr2:12556560-12560262 REVERSE |
| Match: At2G29140.1 |
score: 47.4 |
e-value: 1e-05 |
Identity: 19.75% |
Span: 468bp (49.9%) |
Frame: 2 |
| Symbols: APUM3 | APUM3 (ARABIDOPSIS PUMILIO 3); RNA binding | chr2:12538469-12542137 FORWARD |
| Match: At5G56510.1 |
score: 47.4 |
e-value: 1e-05 |
Identity: 24.5% |
Span: 447bp (47.7%) |
Frame: 2 |
| Symbols: APUM12 | APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding | chr5:22898947-22901068 FORWARD |
| Match: At3G16810.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 20.77% |
Span: 378bp (40.3%) |
Frame: 2 |
| Symbols: APUM24 | APUM24 (ARABIDOPSIS PUMILIO 24); RNA binding | chr3:5723442-5727545 REVERSE |
| Match: At4G08840.1 |
score: 46.2 |
e-value: 3e-05 |
Identity: 24.55% |
Span: 330bp (35.2%) |
Frame: 2 |
| Symbols: APUM11 | APUM11 (ARABIDOPSIS PUMILIO 11); RNA binding | chr4:5631295-5633609 FORWARD |
| Match: At5G56510.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 25.69% |
Span: 318bp (33.9%) |
Frame: 2 |
| Symbols: APUM12 | APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding | chr5:22898947-22901068 FORWARD |
| Match: At1G22240.1 |
score: 45.4 |
e-value: 5e-05 |
Identity: 20% |
Span: 477bp (50.9%) |
Frame: 2 |
| Symbols: APUM8 | APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding | chr1:7853073-7854952 FORWARD |
| Match: At1G35750.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 21.99% |
Span: 411bp (43.8%) |
Frame: 2 |
| Symbols: APUM10 | APUM10 (ARABIDOPSIS PUMILIO 10); RNA binding | chr1:13254610-13256782 REVERSE |
|
| 14 lower scoring hits censored -- only 51 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|92875685|gb|ABE83589.1| |
score: 296 |
e-value: 7e-79 |
Identity: 85.63% |
Span: 522bp (55.7%) |
Frame: 2 |
| Pumilio/Puf |
| Match: gi|34908236|ref|NP_915465.1| |
score: 285 |
e-value: 2e-75 |
Identity: 83.23% |
Span: 501bp (53.4%) |
Frame: 2 |
| gi|34908236|ref|NP_915465.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)... |
| Match: gi|15227038|ref|NP_180478.1| |
score: 282 |
e-value: 1e-74 |
Identity: 85.8% |
Span: 486bp (51.8%) |
Frame: 2 |
| APUM3 (Arabidopsis Pumilio 3); RNA binding / binding [Arabidopsis thaliana] >gi3980417|gb|AAC95220.1| putative pumili... |
| Match: gi|20465637|gb|AAM20149.1| |
score: 280 |
e-value: 5e-74 |
Identity: 83.95% |
Span: 486bp (51.8%) |
Frame: 2 |
| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15227051|ref|NP_180482.1| |
score: 280 |
e-value: 5e-74 |
Identity: 83.95% |
Span: 486bp (51.8%) |
Frame: 2 |
| APUM2 (Arabidopsis Pumilio 2); RNA binding / binding [Arabidopsis thaliana] >gi3980413|gb|AAC95216.1| putative pumili... |
| Match: gi|15227052|ref|NP_180483.1| |
score: 279 |
e-value: 1e-73 |
Identity: 83.95% |
Span: 486bp (51.8%) |
Frame: 2 |
| APUM1 (Arabidopsis Pumilio 1); RNA binding / binding [Arabidopsis thaliana] >gi3980412|gb|AAC95215.1| putative pumili... |
| Match: gi|87241276|gb|ABD33134.1| |
score: 276 |
e-value: 1e-72 |
Identity: 85.19% |
Span: 486bp (51.8%) |
Frame: 2 |
| Nucleic acid binding NABP [Medicago truncatula] |
| Match: gi|50915924|ref|XP_468426.1| |
score: 269 |
e-value: 1e-70 |
Identity: 77.38% |
Span: 504bp (53.7%) |
Frame: 2 |
| gi|50915924|ref|XP_468426.1| pumilio-like [Oryza sativa (japonica cultivar-group)] >gi|48716356|dbj|BAD22967.1| pumil... |
| Match: gi|20513851|gb|AAM22812.1| |
score: 266 |
e-value: 1e-69 |
Identity: 76.47% |
Span: 510bp (54.4%) |
Frame: 2 |
| gi|20513851|gb|AAM22812.1| BPM [Hordeum vulgare] |
| Match: gi|92885524|gb|ABE87830.1| |
score: 266 |
e-value: 1e-69 |
Identity: 73.03% |
Span: 495bp (52.8%) |
Frame: 2 |
| Nucleic |
| Match: gi|50949037|ref|XP_493876.1| |
score: 266 |
e-value: 7e-70 |
Identity: 75.44% |
Span: 513bp (54.7%) |
Frame: 2 |
| gi|50949037|ref|XP_493876.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa] >gi|14719326|gb|AAK73144... |
| Match: gi|26450884|dbj|BAC42549.1| |
score: 265 |
e-value: 2e-69 |
Identity: 75.74% |
Span: 507bp (54.1%) |
Frame: 2 |
| putative RNA binding protein [Arabidopsis thaliana] >gi28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana] |
| Match: gi|22330960|ref|NP_187647.2| |
score: 265 |
e-value: 2e-69 |
Identity: 75.74% |
Span: 507bp (54.1%) |
Frame: 2 |
| APUM4 (Arabidopsis Pumilio 4); RNA binding / binding [Arabidopsis thaliana] |
| Match: gi|34906006|ref|NP_914350.1| |
score: 264 |
e-value: 5e-69 |
Identity: 75.15% |
Span: 507bp (54.1%) |
Frame: 2 |
| gi|34906006|ref|NP_914350.1| P0518C01.14 [Oryza sativa (japonica cultivar-group)] gi|15289982|dbj|BAB63677.1| P0518C0... |
| Match: gi|57899216|dbj|BAD87365.1| |
score: 264 |
e-value: 5e-69 |
Identity: 75.15% |
Span: 507bp (54.1%) |
Frame: 2 |
| gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|52353575|gb|AAU44141.1| |
score: 261 |
e-value: 4e-68 |
Identity: 78.75% |
Span: 480bp (51.2%) |
Frame: 2 |
| gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|6056191|gb|AAF02808.1| |
score: 255 |
e-value: 2e-66 |
Identity: 77.71% |
Span: 471bp (50.2%) |
Frame: 2 |
| gi|6056191|gb|AAF02808.1| putative RNA binding protein [Arabidopsis thaliana] |
| Match: gi|62002537|gb|AAX58753.1| |
score: 254 |
e-value: 3e-66 |
Identity: 78.12% |
Span: 480bp (51.2%) |
Frame: 2 |
| PUF-domain RNA-binding protein [Physcomitrella patens] |
| Match: gi|57834079|emb|CAE02858.2| |
score: 220 |
e-value: 6e-56 |
Identity: 63.35% |
Span: 483bp (51.5%) |
Frame: 2 |
| gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50930571|ref|XP_474813.1| |
score: 220 |
e-value: 6e-56 |
Identity: 63.35% |
Span: 483bp (51.5%) |
Frame: 2 |
| gi|50930571|ref|XP_474813.1| OSJNBa0014F04.24 [Oryza sativa (japonica cultivar-group)] >gi|38345179|emb|CAE03335.2| O... |
| Match: gi|90265098|emb|CAH67711.1| |
score: 220 |
e-value: 6e-56 |
Identity: 63.35% |
Span: 483bp (51.5%) |
Frame: 2 |
| H0512B01.6 |
| Match: gi|50947665|ref|XP_483360.1| |
score: 202 |
e-value: 2e-50 |
Identity: 60.13% |
Span: 474bp (50.5%) |
Frame: 2 |
| gi|50947665|ref|XP_483360.1| putative pumilio-family RNA-binding domain-containing protein(PPD1) [Oryza sativa (japon... |
| Match: gi|9293981|dbj|BAB01884.1| |
score: 194 |
e-value: 5e-48 |
Identity: 60.78% |
Span: 459bp (48.9%) |
Frame: 2 |
| RNA binding protein-like [Arabidopsis thaliana] |
| Match: gi|30685690|ref|NP_188660.3| |
score: 194 |
e-value: 5e-48 |
Identity: 60.78% |
Span: 459bp (48.9%) |
Frame: 2 |
| APUM5 (Arabidopsis Pumilio 5); RNA binding / binding [Arabidopsis thaliana] |
| Match: gi|77556895|gb|ABA99691.1| |
score: 175 |
e-value: 2e-42 |
Identity: 52.83% |
Span: 462bp (49.3%) |
Frame: 2 |
| gi|77556895|gb|ABA99691.1| pumilio/Mpt5 family RNA-binding protein, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8071634|gb|AAF71823.1| |
score: 167 |
e-value: 8e-40 |
Identity: 58.96% |
Span: 402bp (42.9%) |
Frame: 2 |
| gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] |
| Match: gi|79609613|ref|NP_974618.2| |
score: 166 |
e-value: 1e-39 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| RNA |
| Match: gi|79325269|ref|NP_001031720.1| |
score: 166 |
e-value: 1e-39 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| RNA |
| Match: gi|18416639|ref|NP_567733.1| |
score: 166 |
e-value: 1e-39 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| gi|18416639|ref|NP_567733.1| pumilio-related protein [Arabidopsis thaliana] gi|13430772|gb|AAK26008.1| putative pumil... |
| Match: gi|7269439|emb|CAB79443.1| |
score: 166 |
e-value: 1e-39 |
Identity: 51.97% |
Span: 456bp (48.6%) |
Frame: 2 |
| gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana] >gi|4539306|emb|CAB39609.1| pumilio-like prote... |
| Match: gi|91094689|ref|XP_967865.1| |
score: 164 |
e-value: 7e-39 |
Identity: 50% |
Span: 456bp (48.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|110760239|ref|XP_391849.3| |
score: 161 |
e-value: 3e-38 |
Identity: 49.34% |
Span: 456bp (48.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|55236604|gb|EAA13588.2| |
score: 161 |
e-value: 4e-38 |
Identity: 50% |
Span: 456bp (48.6%) |
Frame: 2 |
| gi|55236604|gb|EAA13588.2| ENSANGP00000002715 [Anopheles gambiae str. PEST] >gi|58391117|ref|XP_318367.2| ENSANGP0000... |
| Match: gi|108871194|gb|EAT35419.1| |
score: 161 |
e-value: 4e-38 |
Identity: 50% |
Span: 456bp (48.6%) |
Frame: 2 |
| pumilio |
| Match: gi|76630156|ref|XP_878459.1| |
score: 157 |
e-value: 8e-37 |
Identity: 47.71% |
Span: 456bp (48.6%) |
Frame: 2 |
| gi|76630156|ref|XP_878459.1| PREDICTED: similar to pumilio homolog 2 isoform 8 [Bos taurus] |
| Match: gi|76630154|ref|XP_592016.2| |
score: 157 |
e-value: 8e-37 |
Identity: 47.71% |
Span: 456bp (48.6%) |
Frame: 2 |
| gi|76630154|ref|XP_592016.2| PREDICTED: similar to pumilio homolog 2 isoform 6 [Bos taurus] |
| Match: gi|8071634|gb|AAF71823.1| |
score: 89 |
e-value: 3e-16 |
Identity: 32% |
Span: 450bp (48.0%) |
Frame: 2 |
| gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] |
| Match: gi|79325269|ref|NP_001031720.1| |
score: 85.9 |
e-value: 2e-15 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| RNA |
| Match: gi|7269439|emb|CAB79443.1| |
score: 85.9 |
e-value: 2e-15 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana] >gi|4539306|emb|CAB39609.1| pumilio-like prote... |
| Match: gi|79609613|ref|NP_974618.2| |
score: 85.9 |
e-value: 2e-15 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| RNA |
| Match: gi|18416639|ref|NP_567733.1| |
score: 85.9 |
e-value: 2e-15 |
Identity: 30.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| gi|18416639|ref|NP_567733.1| pumilio-related protein [Arabidopsis thaliana] gi|13430772|gb|AAK26008.1| putative pumil... |
| Match: gi|50947665|ref|XP_483360.1| |
score: 85.5 |
e-value: 3e-15 |
Identity: 29.33% |
Span: 450bp (48.0%) |
Frame: 2 |
| gi|50947665|ref|XP_483360.1| putative pumilio-family RNA-binding domain-containing protein(PPD1) [Oryza sativa (japon... |
| Match: gi|9293981|dbj|BAB01884.1| |
score: 84.7 |
e-value: 5e-15 |
Identity: 28% |
Span: 450bp (48.0%) |
Frame: 2 |
| RNA binding protein-like [Arabidopsis thaliana] |
| Match: gi|30685690|ref|NP_188660.3| |
score: 84.7 |
e-value: 5e-15 |
Identity: 28% |
Span: 450bp (48.0%) |
Frame: 2 |
| APUM5 (Arabidopsis Pumilio 5); RNA binding / binding [Arabidopsis thaliana] |
| Match: gi|91094689|ref|XP_967865.1| |
score: 84.3 |
e-value: 7e-15 |
Identity: 30.99% |
Span: 426bp (45.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76630154|ref|XP_592016.2| |
score: 83.2 |
e-value: 2e-14 |
Identity: 28.97% |
Span: 435bp (46.4%) |
Frame: 2 |
| gi|76630154|ref|XP_592016.2| PREDICTED: similar to pumilio homolog 2 isoform 6 [Bos taurus] |
| Match: gi|110760239|ref|XP_391849.3| |
score: 83.2 |
e-value: 2e-14 |
Identity: 28.87% |
Span: 426bp (45.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|76630156|ref|XP_878459.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 28.97% |
Span: 435bp (46.4%) |
Frame: 2 |
| gi|76630156|ref|XP_878459.1| PREDICTED: similar to pumilio homolog 2 isoform 8 [Bos taurus] |
| Match: gi|62002537|gb|AAX58753.1| |
score: 81.6 |
e-value: 4e-14 |
Identity: 28.28% |
Span: 435bp (46.4%) |
Frame: 2 |
| PUF-domain RNA-binding protein [Physcomitrella patens] |
| Match: gi|108871194|gb|EAT35419.1| |
score: 81.6 |
e-value: 4e-14 |
Identity: 28.87% |
Span: 426bp (45.4%) |
Frame: 2 |
| pumilio |
| Match: gi|55236604|gb|EAA13588.2| |
score: 81.6 |
e-value: 4e-14 |
Identity: 29.58% |
Span: 426bp (45.4%) |
Frame: 2 |
| gi|55236604|gb|EAA13588.2| ENSANGP00000002715 [Anopheles gambiae str. PEST] >gi|58391117|ref|XP_318367.2| ENSANGP0000... |
| Match: gi|15227052|ref|NP_180483.1| |
score: 81.3 |
e-value: 6e-14 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| APUM1 (Arabidopsis Pumilio 1); RNA binding / binding [Arabidopsis thaliana] >gi3980412|gb|AAC95215.1| putative pumili... |
| Match: gi|92885524|gb|ABE87830.1| |
score: 79.7 |
e-value: 2e-13 |
Identity: 27.78% |
Span: 432bp (46.1%) |
Frame: 2 |
| Nucleic |
| Match: gi|15227038|ref|NP_180478.1| |
score: 79.7 |
e-value: 2e-13 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| APUM3 (Arabidopsis Pumilio 3); RNA binding / binding [Arabidopsis thaliana] >gi3980417|gb|AAC95220.1| putative pumili... |
| Match: gi|20465637|gb|AAM20149.1| |
score: 78.2 |
e-value: 5e-13 |
Identity: 27.78% |
Span: 432bp (46.1%) |
Frame: 2 |
| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|15227051|ref|NP_180482.1| |
score: 78.2 |
e-value: 5e-13 |
Identity: 27.78% |
Span: 432bp (46.1%) |
Frame: 2 |
| APUM2 (Arabidopsis Pumilio 2); RNA binding / binding [Arabidopsis thaliana] >gi3980413|gb|AAC95216.1| putative pumili... |
| Match: gi|87241276|gb|ABD33134.1| |
score: 77 |
e-value: 1e-12 |
Identity: 27.78% |
Span: 432bp (46.1%) |
Frame: 2 |
| Nucleic acid binding NABP [Medicago truncatula] |
| Match: gi|26450884|dbj|BAC42549.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| putative RNA binding protein [Arabidopsis thaliana] >gi28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana] |
| Match: gi|6056191|gb|AAF02808.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|6056191|gb|AAF02808.1| putative RNA binding protein [Arabidopsis thaliana] |
| Match: gi|22330960|ref|NP_187647.2| |
score: 75.9 |
e-value: 2e-12 |
Identity: 28.47% |
Span: 432bp (46.1%) |
Frame: 2 |
| APUM4 (Arabidopsis Pumilio 4); RNA binding / binding [Arabidopsis thaliana] |
| Match: gi|110760239|ref|XP_391849.3| |
score: 75.1 |
e-value: 4e-12 |
Identity: 25.64% |
Span: 468bp (49.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|34908236|ref|NP_915465.1| |
score: 75.1 |
e-value: 4e-12 |
Identity: 26.39% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|34908236|ref|NP_915465.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)... |
| Match: gi|91094689|ref|XP_967865.1| |
score: 74.7 |
e-value: 5e-12 |
Identity: 26.92% |
Span: 468bp (49.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|50915924|ref|XP_468426.1| |
score: 73.9 |
e-value: 9e-12 |
Identity: 26.39% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|50915924|ref|XP_468426.1| pumilio-like [Oryza sativa (japonica cultivar-group)] >gi|48716356|dbj|BAD22967.1| pumil... |
| Match: gi|52353575|gb|AAU44141.1| |
score: 72.8 |
e-value: 2e-11 |
Identity: 26.39% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50949037|ref|XP_493876.1| |
score: 72.8 |
e-value: 2e-11 |
Identity: 26.39% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|50949037|ref|XP_493876.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa] >gi|14719326|gb|AAK73144... |
| Match: gi|92875685|gb|ABE83589.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 25% |
Span: 432bp (46.1%) |
Frame: 2 |
| Pumilio/Puf |
| Match: gi|57899216|dbj|BAD87365.1| |
score: 69.3 |
e-value: 2e-10 |
Identity: 25.69% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|20513851|gb|AAM22812.1| |
score: 68.9 |
e-value: 3e-10 |
Identity: 25.69% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|20513851|gb|AAM22812.1| BPM [Hordeum vulgare] |
| Match: gi|77556895|gb|ABA99691.1| |
score: 67.4 |
e-value: 9e-10 |
Identity: 24.83% |
Span: 435bp (46.4%) |
Frame: 2 |
| gi|77556895|gb|ABA99691.1| pumilio/Mpt5 family RNA-binding protein, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30685690|ref|NP_188660.3| |
score: 67 |
e-value: 1e-09 |
Identity: 27.61% |
Span: 480bp (51.2%) |
Frame: 2 |
| APUM5 (Arabidopsis Pumilio 5); RNA binding / binding [Arabidopsis thaliana] |
| Match: gi|76630154|ref|XP_592016.2| |
score: 66.6 |
e-value: 1e-09 |
Identity: 25.16% |
Span: 465bp (49.6%) |
Frame: 2 |
| gi|76630154|ref|XP_592016.2| PREDICTED: similar to pumilio homolog 2 isoform 6 [Bos taurus] |
| Match: gi|76630156|ref|XP_878459.1| |
score: 66.6 |
e-value: 1e-09 |
Identity: 25.16% |
Span: 465bp (49.6%) |
Frame: 2 |
| gi|76630156|ref|XP_878459.1| PREDICTED: similar to pumilio homolog 2 isoform 8 [Bos taurus] |
| Match: gi|90265098|emb|CAH67711.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 27.34% |
Span: 417bp (44.5%) |
Frame: 2 |
| H0512B01.6 |
| Match: gi|50930571|ref|XP_474813.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 27.34% |
Span: 417bp (44.5%) |
Frame: 2 |
| gi|50930571|ref|XP_474813.1| OSJNBa0014F04.24 [Oryza sativa (japonica cultivar-group)] >gi|38345179|emb|CAE03335.2| O... |
| Match: gi|57834079|emb|CAE02858.2| |
score: 65.5 |
e-value: 3e-09 |
Identity: 27.34% |
Span: 417bp (44.5%) |
Frame: 2 |
| gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|62002537|gb|AAX58753.1| |
score: 64.7 |
e-value: 6e-09 |
Identity: 25% |
Span: 465bp (49.6%) |
Frame: 2 |
| PUF-domain RNA-binding protein [Physcomitrella patens] |
| Match: gi|62002537|gb|AAX58753.1| |
score: 63.2 |
e-value: 2e-08 |
Identity: 21.69% |
Span: 498bp (53.1%) |
Frame: 2 |
| PUF-domain RNA-binding protein [Physcomitrella patens] |
| Match: gi|9293981|dbj|BAB01884.1| |
score: 62.4 |
e-value: 3e-08 |
Identity: 27.44% |
Span: 480bp (51.2%) |
Frame: 2 |
| RNA binding protein-like [Arabidopsis thaliana] |
| Match: gi|34906006|ref|NP_914350.1| |
score: 60.8 |
e-value: 8e-08 |
Identity: 25% |
Span: 432bp (46.1%) |
Frame: 2 |
| gi|34906006|ref|NP_914350.1| P0518C01.14 [Oryza sativa (japonica cultivar-group)] gi|15289982|dbj|BAB63677.1| P0518C0... |
| Match: gi|8071634|gb|AAF71823.1| |
score: 60.8 |
e-value: 8e-08 |
Identity: 26.35% |
Span: 441bp (47.0%) |
Frame: 2 |
| gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] |
| Match: gi|108871194|gb|EAT35419.1| |
score: 60.8 |
e-value: 8e-08 |
Identity: 22.06% |
Span: 585bp (62.4%) |
Frame: 2 |
| pumilio |
| Match: gi|55236604|gb|EAA13588.2| |
score: 58.9 |
e-value: 3e-07 |
Identity: 21.57% |
Span: 585bp (62.4%) |
Frame: 2 |
| gi|55236604|gb|EAA13588.2| ENSANGP00000002715 [Anopheles gambiae str. PEST] >gi|58391117|ref|XP_318367.2| ENSANGP0000... |
| Match: gi|77556895|gb|ABA99691.1| |
score: 58.2 |
e-value: 5e-07 |
Identity: 23.19% |
Span: 414bp (44.1%) |
Frame: 2 |
| gi|77556895|gb|ABA99691.1| pumilio/Mpt5 family RNA-binding protein, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34908236|ref|NP_915465.1| |
score: 56.6 |
e-value: 2e-06 |
Identity: 22.67% |
Span: 450bp (48.0%) |
Frame: 2 |
| gi|34908236|ref|NP_915465.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)... |
| Match: gi|50915924|ref|XP_468426.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 23.23% |
Span: 465bp (49.6%) |
Frame: 2 |
| gi|50915924|ref|XP_468426.1| pumilio-like [Oryza sativa (japonica cultivar-group)] >gi|48716356|dbj|BAD22967.1| pumil... |
| Match: gi|79325269|ref|NP_001031720.1| |
score: 54.7 |
e-value: 6e-06 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| RNA |
| Match: gi|7269439|emb|CAB79443.1| |
score: 54.7 |
e-value: 6e-06 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana] >gi|4539306|emb|CAB39609.1| pumilio-like prote... |
| Match: gi|18416639|ref|NP_567733.1| |
score: 54.7 |
e-value: 6e-06 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| gi|18416639|ref|NP_567733.1| pumilio-related protein [Arabidopsis thaliana] gi|13430772|gb|AAK26008.1| putative pumil... |
| Match: gi|79609613|ref|NP_974618.2| |
score: 54.7 |
e-value: 6e-06 |
Identity: 23.38% |
Span: 462bp (49.3%) |
Frame: 2 |
| RNA |
| Match: gi|76630154|ref|XP_592016.2| |
score: 53.9 |
e-value: 1e-05 |
Identity: 28.7% |
Span: 324bp (34.5%) |
Frame: 2 |
| gi|76630154|ref|XP_592016.2| PREDICTED: similar to pumilio homolog 2 isoform 6 [Bos taurus] |
| Match: gi|76630156|ref|XP_878459.1| |
score: 53.9 |
e-value: 1e-05 |
Identity: 28.7% |
Span: 324bp (34.5%) |
Frame: 2 |
| gi|76630156|ref|XP_878459.1| PREDICTED: similar to pumilio homolog 2 isoform 8 [Bos taurus] |
| Match: gi|55236604|gb|EAA13588.2| |
score: 53.5 |
e-value: 1e-05 |
Identity: 26.61% |
Span: 327bp (34.9%) |
Frame: 2 |
| gi|55236604|gb|EAA13588.2| ENSANGP00000002715 [Anopheles gambiae str. PEST] >gi|58391117|ref|XP_318367.2| ENSANGP0000... |
| Match: gi|50947665|ref|XP_483360.1| |
score: 53.5 |
e-value: 1e-05 |
Identity: 20.86% |
Span: 414bp (44.1%) |
Frame: 2 |
| gi|50947665|ref|XP_483360.1| putative pumilio-family RNA-binding domain-containing protein(PPD1) [Oryza sativa (japon... |
| Match: gi|20513851|gb|AAM22812.1| |
score: 53.5 |
e-value: 1e-05 |
Identity: 21.48% |
Span: 447bp (47.7%) |
Frame: 2 |
| gi|20513851|gb|AAM22812.1| BPM [Hordeum vulgare] |
| Match: gi|52353575|gb|AAU44141.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 23.9% |
Span: 465bp (49.6%) |
Frame: 2 |
| gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15227051|ref|NP_180482.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 20.37% |
Span: 483bp (51.5%) |
Frame: 2 |
| APUM2 (Arabidopsis Pumilio 2); RNA binding / binding [Arabidopsis thaliana] >gi3980413|gb|AAC95216.1| putative pumili... |
| Match: gi|20465637|gb|AAM20149.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 20.37% |
Span: 483bp (51.5%) |
Frame: 2 |
| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|50930571|ref|XP_474813.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 25% |
Span: 348bp (37.1%) |
Frame: 2 |
| gi|50930571|ref|XP_474813.1| OSJNBa0014F04.24 [Oryza sativa (japonica cultivar-group)] >gi|38345179|emb|CAE03335.2| O... |
| Match: gi|90265098|emb|CAH67711.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 25% |
Span: 348bp (37.1%) |
Frame: 2 |
| H0512B01.6 |
|
| 718 lower scoring hits censored -- only 100 best hits are stored. |
