| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|147769276|emb|CAN61580.1| |
score: 215 |
e-value: 5e-54 |
Identity: 56.37% |
Span: 612bp (62.4%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157335837|emb|CAO61667.1| |
score: 215 |
e-value: 5e-54 |
Identity: 56.37% |
Span: 612bp (62.4%) |
Frame: 2 |
| unnamed |
| Match: gi|22328520|ref|NP_192643.2| |
score: 196 |
e-value: 3e-48 |
Identity: 47.7% |
Span: 714bp (72.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi38603886|gb|AAR24688.1| At4g09040 [Arabidops... |
| Match: gi|51969402|dbj|BAD43393.1| |
score: 195 |
e-value: 4e-48 |
Identity: 47.7% |
Span: 714bp (72.9%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|145332989|ref|NP_001078360.1| |
score: 186 |
e-value: 3e-45 |
Identity: 52.58% |
Span: 579bp (59.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|157341945|emb|CAO63401.1| |
score: 144 |
e-value: 1e-32 |
Identity: 39.18% |
Span: 672bp (68.6%) |
Frame: 2 |
| unnamed |
| Match: gi|115476954|ref|NP_001062073.1| |
score: 140 |
e-value: 2e-31 |
Identity: 46.2% |
Span: 510bp (52.0%) |
Frame: 2 |
| Os08g0483200 [Oryza sativa (japonica cultivar-group)] >gi42408160|dbj|BAD09298.1| putative RNA-binding protein cp33 [... |
| Match: gi|118489861|gb|ABK96729.1| |
score: 139 |
e-value: 3e-31 |
Identity: 42.33% |
Span: 549bp (56.0%) |
Frame: 2 |
| unknown [Populus trichocarpa x Populus deltoides] |
| Match: gi|116311029|emb|CAH67960.1| |
score: 136 |
e-value: 3e-30 |
Identity: 37.5% |
Span: 675bp (68.9%) |
Frame: 2 |
| OSIGBa0142I02-OSIGBa0101B20.3 [Oryza sativa (indica cultivar-group)] |
| Match: gi|115460220|ref|NP_001053710.1| |
score: 136 |
e-value: 3e-30 |
Identity: 37.5% |
Span: 675bp (68.9%) |
Frame: 2 |
| Os04g0591000 [Oryza sativa (japonica cultivar-group)] >gi38346724|emb|CAE04874.2| OSJNBa0086O06.22 [Oryza sativa (jap... |
| Match: gi|7267547|emb|CAB78028.1| |
score: 135 |
e-value: 4e-30 |
Identity: 47.09% |
Span: 513bp (52.3%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|15226983|ref|NP_181084.1| |
score: 133 |
e-value: 2e-29 |
Identity: 38.19% |
Span: 582bp (59.4%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi360814... |
| Match: gi|195637832|gb|ACG38384.1| |
score: 132 |
e-value: 6e-29 |
Identity: 41.95% |
Span: 603bp (61.5%) |
Frame: 2 |
| ribonucleoprotein |
| Match: gi|194696360|gb|ACF82264.1| |
score: 131 |
e-value: 1e-28 |
Identity: 41.95% |
Span: 603bp (61.5%) |
Frame: 2 |
| unknown [Zea mays] |
| Match: gi|125549538|gb|EAY95360.1| |
score: 131 |
e-value: 1e-28 |
Identity: 36.67% |
Span: 675bp (68.9%) |
Frame: 2 |
| hypothetical protein OsI_17193 [Oryza sativa Indica Group] |
| Match: gi|195613392|gb|ACG28526.1| |
score: 128 |
e-value: 8e-28 |
Identity: 40.57% |
Span: 525bp (53.6%) |
Frame: 2 |
| plastid-specific |
| Match: gi|157336790|emb|CAO71475.1| |
score: 113 |
e-value: 2e-23 |
Identity: 34.41% |
Span: 711bp (72.6%) |
Frame: 2 |
| unnamed |
| Match: gi|118486835|gb|ABK95252.1| |
score: 105 |
e-value: 8e-21 |
Identity: 33.03% |
Span: 654bp (66.7%) |
Frame: 2 |
| unknown |
| Match: gi|125541605|gb|EAY88000.1| |
score: 103 |
e-value: 3e-20 |
Identity: 37.43% |
Span: 558bp (56.9%) |
Frame: 2 |
| hypothetical protein OsI_09422 [Oryza sativa Indica Group] |
| Match: gi|115449577|ref|NP_001048500.1| |
score: 100 |
e-value: 2e-19 |
Identity: 37.78% |
Span: 537bp (54.8%) |
Frame: 2 |
| Os02g0815200 [Oryza sativa (japonica cultivar-group)] >gi47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 p... |
| Match: gi|125591465|gb|EAZ31815.1| |
score: 99.8 |
e-value: 3e-19 |
Identity: 44.27% |
Span: 393bp (40.1%) |
Frame: 2 |
| hypothetical protein OsJ_15973 [Oryza sativa Japonica Group] |
| Match: gi|51968436|dbj|BAD42910.1| |
score: 98.6 |
e-value: 7e-19 |
Identity: 44.26% |
Span: 366bp (37.3%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|558629|emb|CAA57551.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 36.36% |
Span: 552bp (56.3%) |
Frame: 2 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|217073820|gb|ACJ85270.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 37.1% |
Span: 549bp (56.0%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|15218972|ref|NP_176208.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 32.22% |
Span: 678bp (69.2%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|2104687|emb|CAA66479.1| |
score: 97.4 |
e-value: 2e-18 |
Identity: 37.43% |
Span: 552bp (56.3%) |
Frame: 2 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|125544079|gb|EAY90218.1| |
score: 95.9 |
e-value: 5e-18 |
Identity: 33.05% |
Span: 672bp (68.6%) |
Frame: 2 |
| hypothetical protein OsI_11785 [Oryza sativa Indica Group] |
| Match: gi|115453241|ref|NP_001050221.1| |
score: 95.9 |
e-value: 5e-18 |
Identity: 33.05% |
Span: 672bp (68.6%) |
Frame: 2 |
| Os03g0376600 [Oryza sativa (japonica cultivar-group)] >gi18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotei... |
| Match: gi|168033890|ref|XP_001769447.1| |
score: 95.9 |
e-value: 5e-18 |
Identity: 35.96% |
Span: 525bp (53.6%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162679367|gb|EDQ65816.1| predicted protein [Physcomitrella... |
| Match: gi|115477771|ref|NP_001062481.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 36.67% |
Span: 537bp (54.8%) |
Frame: 2 |
| Os08g0557100 |
| Match: gi|125562527|gb|EAZ07975.1| |
score: 94.4 |
e-value: 1e-17 |
Identity: 36.67% |
Span: 537bp (54.8%) |
Frame: 2 |
| hypothetical |
| Match: gi|115480705|ref|NP_001063946.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 34.92% |
Span: 558bp (56.9%) |
Frame: 2 |
| Os09g0565200 [Oryza sativa (japonica cultivar-group)] >gi52076131|dbj|BAD46644.1| putative nucleic acid-binding prote... |
| Match: gi|116793682|gb|ABK26841.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 35.23% |
Span: 501bp (51.1%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|116781814|gb|ABK22250.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 35.23% |
Span: 501bp (51.1%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|148908208|gb|ABR17219.1| |
score: 92.8 |
e-value: 4e-17 |
Identity: 29.76% |
Span: 612bp (62.4%) |
Frame: 2 |
| unknown |
| Match: gi|3550483|emb|CAA11893.1| |
score: 91.3 |
e-value: 1e-16 |
Identity: 35.29% |
Span: 504bp (51.4%) |
Frame: 2 |
| gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] |
| Match: gi|194698792|gb|ACF83480.1| |
score: 90.9 |
e-value: 1e-16 |
Identity: 31.84% |
Span: 519bp (53.0%) |
Frame: 2 |
| unknown |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 90.9 |
e-value: 1e-16 |
Identity: 30.56% |
Span: 702bp (71.6%) |
Frame: 2 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|168029395|ref|XP_001767211.1| |
score: 90.9 |
e-value: 1e-16 |
Identity: 34.66% |
Span: 489bp (49.9%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162681466|gb|EDQ67892.1| predicted protein [Physcomitrella... |
| Match: gi|116786296|gb|ABK24055.1| |
score: 90.5 |
e-value: 2e-16 |
Identity: 32.64% |
Span: 546bp (55.7%) |
Frame: 2 |
| unknown |
| Match: gi|149392545|gb|ABR26075.1| |
score: 90.5 |
e-value: 2e-16 |
Identity: 35.56% |
Span: 516bp (52.7%) |
Frame: 2 |
| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|195620768|gb|ACG32214.1| |
score: 90.5 |
e-value: 2e-16 |
Identity: 32.24% |
Span: 627bp (64.0%) |
Frame: 2 |
| ribonucleoprotein |
| Match: gi|149391365|gb|ABR25700.1| |
score: 90.5 |
e-value: 2e-16 |
Identity: 36.09% |
Span: 504bp (51.4%) |
Frame: 2 |
| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group] |
| Match: gi|7267548|emb|CAB78029.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 42.15% |
Span: 363bp (37.0%) |
Frame: 2 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|195611722|gb|ACG27691.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 31.84% |
Span: 519bp (53.0%) |
Frame: 2 |
| ribonucleoprotein [Zea mays] |
| Match: gi|125559266|gb|EAZ04802.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 35.56% |
Span: 516bp (52.7%) |
Frame: 2 |
| hypothetical protein OsI_26976 [Oryza sativa Indica Group] |
| Match: gi|115473531|ref|NP_001060364.1| |
score: 90.1 |
e-value: 3e-16 |
Identity: 35.56% |
Span: 516bp (52.7%) |
Frame: 2 |
| Os07g0631900 [Oryza sativa (japonica cultivar-group)] >gi22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A... |
| Match: gi|195624584|gb|ACG34122.1| |
score: 89.7 |
e-value: 3e-16 |
Identity: 37.06% |
Span: 504bp (51.4%) |
Frame: 2 |
| ribonucleoprotein |
| Match: gi|212274649|ref|NP_001130287.1| |
score: 89.7 |
e-value: 3e-16 |
Identity: 37.06% |
Span: 504bp (51.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|3550467|emb|CAA06469.1| |
score: 89.4 |
e-value: 4e-16 |
Identity: 35.5% |
Span: 504bp (51.4%) |
Frame: 2 |
| gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|219363077|ref|NP_001137027.1| |
score: 89.4 |
e-value: 4e-16 |
Identity: 33.69% |
Span: 555bp (56.6%) |
Frame: 2 |
| hypothetical protein LOC100217196 [Zea mays] >gi194698058|gb|ACF83113.1| unknown [Zea mays] |
| Match: gi|148907319|gb|ABR16796.1| |
score: 89.4 |
e-value: 4e-16 |
Identity: 29.48% |
Span: 693bp (70.7%) |
Frame: 2 |
| unknown |
| Match: gi|1015370|gb|AAA79045.1| |
score: 89 |
e-value: 6e-16 |
Identity: 34.24% |
Span: 540bp (55.1%) |
Frame: 2 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 89 |
e-value: 6e-16 |
Identity: 30.12% |
Span: 702bp (71.6%) |
Frame: 2 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|195649373|gb|ACG44154.1| |
score: 88.2 |
e-value: 1e-15 |
Identity: 29.3% |
Span: 681bp (69.5%) |
Frame: 2 |
| ribonucleoprotein |
| Match: gi|168054274|ref|XP_001779557.1| |
score: 87.4 |
e-value: 2e-15 |
Identity: 29.65% |
Span: 564bp (57.6%) |
Frame: 2 |
| predicted |
| Match: gi|162463757|ref|NP_001105347.1| |
score: 87 |
e-value: 2e-15 |
Identity: 34.32% |
Span: 504bp (51.4%) |
Frame: 2 |
| nucleic acid binding protein1 [Zea mays] >gi168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays] >gi|1956373... |
| Match: gi|195625314|gb|ACG34487.1| |
score: 87 |
e-value: 2e-15 |
Identity: 33.73% |
Span: 504bp (51.4%) |
Frame: 2 |
| ribonucleoprotein |
| Match: gi|2443390|dbj|BAA22411.1| |
score: 86.7 |
e-value: 3e-15 |
Identity: 34.91% |
Span: 504bp (51.4%) |
Frame: 2 |
| gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|681908|dbj|BAA06521.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|510240|emb|CAA43420.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|475719|gb|AAA18379.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|681906|dbj|BAA06520.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|125606657|gb|EAZ45693.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.69% |
Span: 552bp (56.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|15294254|gb|AAK95304.1|AF410318_1 |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| AT4g24770/F22K18_30 [Arabidopsis thaliana] >gi23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] |
| Match: gi|15233980|ref|NP_194208.1| |
score: 86.3 |
e-value: 4e-15 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| gi|15233980|ref|NP_194208.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|133246|sp|P19682|ROC3_NICSY |
score: 85.9 |
e-value: 5e-15 |
Identity: 32.63% |
Span: 567bp (57.9%) |
Frame: 2 |
| gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) gi|100388|pir||S12109 ribonucl... |
| Match: gi|2330647|emb|CAA74889.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 34.59% |
Span: 546bp (55.7%) |
Frame: 2 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|19032260|emb|CAD18921.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 33.17% |
Span: 555bp (56.6%) |
Frame: 2 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|147838354|emb|CAN61133.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 34.62% |
Span: 543bp (55.4%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157342097|emb|CAO64210.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 34.62% |
Span: 543bp (55.4%) |
Frame: 2 |
| unnamed |
| Match: gi|99029149|gb|ABF60862.1| |
score: 85.9 |
e-value: 5e-15 |
Identity: 37.28% |
Span: 504bp (51.4%) |
Frame: 2 |
| GRSF |
| Match: gi|17064758|gb|AAL32533.1| |
score: 85.5 |
e-value: 6e-15 |
Identity: 31.46% |
Span: 504bp (51.4%) |
Frame: 2 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|157327300|emb|CAO15093.1| |
score: 85.5 |
e-value: 6e-15 |
Identity: 29.63% |
Span: 675bp (68.9%) |
Frame: 2 |
| unnamed |
| Match: gi|17432522|gb|AAL39067.1|AF389431_1 |
score: 84.3 |
e-value: 1e-14 |
Identity: 30.69% |
Span: 570bp (58.2%) |
Frame: 2 |
| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 84.3 |
e-value: 1e-14 |
Identity: 33.14% |
Span: 504bp (51.4%) |
Frame: 2 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|116787606|gb|ABK24573.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 32.42% |
Span: 543bp (55.4%) |
Frame: 2 |
| unknown |
| Match: gi|681912|dbj|BAA06523.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 31.46% |
Span: 504bp (51.4%) |
Frame: 2 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|1054915|gb|AAA81023.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 34.22% |
Span: 555bp (56.6%) |
Frame: 2 |
| gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] |
| Match: gi|21309|emb|CAA41023.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 33.14% |
Span: 504bp (51.4%) |
Frame: 2 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 84.3 |
e-value: 1e-14 |
Identity: 31.46% |
Span: 504bp (51.4%) |
Frame: 2 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|116788830|gb|ABK25016.1| |
score: 84 |
e-value: 2e-14 |
Identity: 32.42% |
Span: 543bp (55.4%) |
Frame: 2 |
| unknown |
| Match: gi|15240641|ref|NP_199836.1| |
score: 84 |
e-value: 2e-14 |
Identity: 34.71% |
Span: 504bp (51.4%) |
Frame: 2 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|3550485|emb|CAA11894.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 31.11% |
Span: 507bp (51.7%) |
Frame: 2 |
| cp33Hv [Hordeum vulgare subsp. vulgare] |
| Match: gi|133249|sp|P19684|ROC5_NICSY |
score: 82.8 |
e-value: 4e-14 |
Identity: 29.69% |
Span: 546bp (55.7%) |
Frame: 2 |
| gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor gi|100390|pir||S12111 ribonucleoprotei... |
| Match: gi|157347527|emb|CAO18164.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 29.12% |
Span: 708bp (72.2%) |
Frame: 2 |
| unnamed |
| Match: gi|118486956|gb|ABK95311.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 30.97% |
Span: 645bp (65.8%) |
Frame: 2 |
| unknown |
| Match: gi|157345365|emb|CAO14663.1| |
score: 82.8 |
e-value: 4e-14 |
Identity: 32.22% |
Span: 537bp (54.8%) |
Frame: 2 |
| unnamed |
| Match: gi|133248|sp|P19683|ROC4_NICSY |
score: 82.4 |
e-value: 5e-14 |
Identity: 32.14% |
Span: 582bp (59.4%) |
Frame: 2 |
| gi|133248|sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor gi|100295|pir||S22548 ribonucleoprotei... |
| Match: gi|15228102|ref|NP_181259.1| |
score: 82.4 |
e-value: 5e-14 |
Identity: 31.25% |
Span: 516bp (52.7%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|475720|gb|AAA18380.1| |
score: 82.4 |
e-value: 5e-14 |
Identity: 37.75% |
Span: 450bp (45.9%) |
Frame: 2 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|21617920|gb|AAM66970.1| |
score: 82.4 |
e-value: 5e-14 |
Identity: 31.25% |
Span: 516bp (52.7%) |
Frame: 2 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|115470657|ref|NP_001058927.1| |
score: 82 |
e-value: 7e-14 |
Identity: 28.06% |
Span: 561bp (57.2%) |
Frame: 2 |
| Os07g0158300 [Oryza sativa (japonica cultivar-group)] >gi34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza... |
| Match: gi|311952|emb|CAA41253.1| |
score: 81.6 |
e-value: 9e-14 |
Identity: 29.69% |
Span: 546bp (55.7%) |
Frame: 2 |
| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris] |
| Match: gi|217073784|gb|ACJ85252.1| |
score: 81.3 |
e-value: 1e-13 |
Identity: 29.06% |
Span: 657bp (67.0%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|115478330|ref|NP_001062760.1| |
score: 80.9 |
e-value: 2e-13 |
Identity: 32.98% |
Span: 558bp (56.9%) |
Frame: 2 |
| Os09g0279500 |
| Match: gi|168054234|ref|XP_001779537.1| |
score: 80.5 |
e-value: 2e-13 |
Identity: 27.42% |
Span: 498bp (50.8%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162669018|gb|EDQ55613.1| predicted protein [Physcomitrella... |
| Match: gi|157349179|emb|CAO24325.1| |
score: 80.1 |
e-value: 3e-13 |
Identity: 29.49% |
Span: 675bp (68.9%) |
Frame: 2 |
| unnamed |
| Match: gi|19032262|emb|CAD18922.1| |
score: 79.7 |
e-value: 3e-13 |
Identity: 29.85% |
Span: 567bp (57.9%) |
Frame: 2 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|168274276|dbj|BAG09558.1| |
score: 79.7 |
e-value: 3e-13 |
Identity: 32.24% |
Span: 546bp (55.7%) |
Frame: 2 |
| chloroplast RNA binding protein [Mesembryanthemum crystallinum] |
|
| 13 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At4G09040.1 |
score: 196 |
e-value: 2e-50 |
Identity: 47.7% |
Span: 714bp (72.9%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797312 REVERSE |
| Match: At4G09040.2 |
score: 186 |
e-value: 2e-47 |
Identity: 52.58% |
Span: 579bp (59.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797190 REVERSE |
| Match: At2G35410.1 |
score: 133 |
e-value: 1e-31 |
Identity: 38.19% |
Span: 582bp (59.4%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G60000.1 |
score: 97.4 |
e-value: 1e-20 |
Identity: 32.22% |
Span: 678bp (69.2%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At4G24770.1 |
score: 86.3 |
e-value: 3e-17 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At3G52380.1 |
score: 84.3 |
e-value: 1e-16 |
Identity: 31.46% |
Span: 504bp (51.4%) |
Frame: 2 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At5G50250.1 |
score: 84 |
e-value: 1e-16 |
Identity: 34.71% |
Span: 504bp (51.4%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At2G37220.1 |
score: 82.4 |
e-value: 4e-16 |
Identity: 31.25% |
Span: 516bp (52.7%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G52150.1 |
score: 71.6 |
e-value: 7e-13 |
Identity: 27.94% |
Span: 666bp (68.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.2 |
score: 71.6 |
e-value: 7e-13 |
Identity: 27.94% |
Span: 666bp (68.0%) |
Frame: 2 |
| RNA binding | chr3:19353052-19354068 FORWARD |
|
| swissprot [blastx] | Showing best 9 hits recorded |
| Match: Q08935 |
score: 90.9 |
e-value: 1e-17 |
Identity: 30.56% |
Span: 702bp (71.6%) |
Frame: 2 |
| 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 |
| Match: P49313 |
score: 89 |
e-value: 4e-17 |
Identity: 30.12% |
Span: 702bp (71.6%) |
Frame: 2 |
| 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 |
| Match: Q04836 |
score: 86.3 |
e-value: 2e-16 |
Identity: 33.16% |
Span: 558bp (56.9%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1 |
| Match: P19682 |
score: 85.9 |
e-value: 3e-16 |
Identity: 32.63% |
Span: 567bp (57.9%) |
Frame: 2 |
| 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 |
| Match: P28644 |
score: 84.3 |
e-value: 9e-16 |
Identity: 33.14% |
Span: 504bp (51.4%) |
Frame: 2 |
| 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 |
| Match: P19684 |
score: 82.8 |
e-value: 3e-15 |
Identity: 29.69% |
Span: 546bp (55.7%) |
Frame: 2 |
| 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 |
| Match: Q9ZUU4 |
score: 82.4 |
e-value: 3e-15 |
Identity: 31.25% |
Span: 516bp (52.7%) |
Frame: 2 |
| Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1 |
| Match: P19683 |
score: 82.4 |
e-value: 3e-15 |
Identity: 32.14% |
Span: 582bp (59.4%) |
Frame: 2 |
| 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 |
| Match: P82277 |
score: 75.9 |
e-value: 3e-13 |
Identity: 29.17% |
Span: 555bp (56.6%) |
Frame: 2 |
| 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1 |
|