| arabidopsis/peptide [blastx] | Showing best 66 hits recorded |
| Match: At4G09040.1 |
score: 201 |
e-value: 4e-52 |
Identity: 46.51% |
Span: 771bp (78.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797312 REVERSE |
| Match: At2G35410.1 |
score: 133 |
e-value: 2e-31 |
Identity: 37.19% |
Span: 582bp (59.1%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G60000.1 |
score: 100 |
e-value: 2e-21 |
Identity: 31.62% |
Span: 720bp (73.2%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At3G52380.1 |
score: 87.4 |
e-value: 1e-17 |
Identity: 28% |
Span: 702bp (71.3%) |
Frame: 3 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At4G24770.1 |
score: 86.3 |
e-value: 3e-17 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At5G50250.1 |
score: 84.3 |
e-value: 1e-16 |
Identity: 34.71% |
Span: 504bp (51.2%) |
Frame: 3 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At2G37220.1 |
score: 83.6 |
e-value: 2e-16 |
Identity: 31.25% |
Span: 516bp (52.4%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At3G52150.1 |
score: 73.6 |
e-value: 2e-13 |
Identity: 27.94% |
Span: 666bp (67.7%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.2 |
score: 73.6 |
e-value: 2e-13 |
Identity: 27.94% |
Span: 666bp (67.7%) |
Frame: 3 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At1G01080.1 |
score: 70.5 |
e-value: 1e-12 |
Identity: 29.71% |
Span: 495bp (50.3%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At1G01080.2 |
score: 69.7 |
e-value: 3e-12 |
Identity: 29.55% |
Span: 495bp (50.3%) |
Frame: 3 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At3G53460.2 |
score: 60.8 |
e-value: 1e-09 |
Identity: 45.21% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.1 |
score: 60.8 |
e-value: 1e-09 |
Identity: 45.21% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At2G36660.1 |
score: 59.3 |
e-value: 3e-09 |
Identity: 24% |
Span: 582bp (59.1%) |
Frame: 3 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At3G16380.1 |
score: 58.9 |
e-value: 4e-09 |
Identity: 28.5% |
Span: 567bp (57.6%) |
Frame: 3 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At1G47490.2 |
score: 54.7 |
e-value: 8e-08 |
Identity: 30.88% |
Span: 402bp (40.9%) |
Frame: 3 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17428554 FORWARD |
| Match: At1G47490.1 |
score: 54.7 |
e-value: 8e-08 |
Identity: 30.88% |
Span: 402bp (40.9%) |
Frame: 3 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At2G36660.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 23.33% |
Span: 513bp (52.1%) |
Frame: 3 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At4G34110.1 |
score: 53.1 |
e-value: 2e-07 |
Identity: 24.23% |
Span: 555bp (56.4%) |
Frame: 3 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At3G53460.1 |
score: 52.4 |
e-value: 4e-07 |
Identity: 35.44% |
Span: 237bp (24.1%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G19130.1 |
score: 52.4 |
e-value: 4e-07 |
Identity: 29.49% |
Span: 459bp (46.6%) |
Frame: 3 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At3G53460.2 |
score: 52.4 |
e-value: 4e-07 |
Identity: 35.44% |
Span: 237bp (24.1%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.1 |
score: 52 |
e-value: 5e-07 |
Identity: 40.54% |
Span: 216bp (22.0%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.2 |
score: 52 |
e-value: 5e-07 |
Identity: 40.54% |
Span: 216bp (22.0%) |
Frame: 3 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G13850.2 |
score: 51.6 |
e-value: 7e-07 |
Identity: 42.47% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.1 |
score: 51.6 |
e-value: 7e-07 |
Identity: 42.47% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At1G49600.1 |
score: 51.6 |
e-value: 7e-07 |
Identity: 28.21% |
Span: 459bp (46.6%) |
Frame: 3 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At1G47500.1 |
score: 51.2 |
e-value: 9e-07 |
Identity: 30.3% |
Span: 390bp (39.6%) |
Frame: 3 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At2G18510.1 |
score: 51.2 |
e-value: 9e-07 |
Identity: 25.66% |
Span: 453bp (46.0%) |
Frame: 3 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At3G14100.1 |
score: 51.2 |
e-value: 9e-07 |
Identity: 26.01% |
Span: 519bp (52.7%) |
Frame: 3 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At1G71770.1 |
score: 50.8 |
e-value: 1e-06 |
Identity: 26.42% |
Span: 552bp (56.1%) |
Frame: 3 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G54080.1 |
score: 50.4 |
e-value: 2e-06 |
Identity: 25.62% |
Span: 585bp (59.5%) |
Frame: 3 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At2G23350.1 |
score: 50.1 |
e-value: 2e-06 |
Identity: 23.5% |
Span: 537bp (54.6%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At5G19350.1 |
score: 50.1 |
e-value: 2e-06 |
Identity: 25.79% |
Span: 468bp (47.6%) |
Frame: 3 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At4G13860.1 |
score: 49.7 |
e-value: 3e-06 |
Identity: 41.1% |
Span: 219bp (22.3%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At1G22760.1 |
score: 49.3 |
e-value: 4e-06 |
Identity: 27.07% |
Span: 516bp (52.4%) |
Frame: 3 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G71770.1 |
score: 48.9 |
e-value: 5e-06 |
Identity: 23.44% |
Span: 570bp (57.9%) |
Frame: 3 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At5G19030.1 |
score: 48.9 |
e-value: 5e-06 |
Identity: 36.84% |
Span: 228bp (23.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:6357505-6359083 REVERSE |
| Match: At1G54080.2 |
score: 48.9 |
e-value: 5e-06 |
Identity: 25.73% |
Span: 585bp (59.5%) |
Frame: 3 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At3G23830.2 |
score: 48.9 |
e-value: 5e-06 |
Identity: 39.73% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At3G23830.1 |
score: 48.9 |
e-value: 5e-06 |
Identity: 39.73% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At1G22760.1 |
score: 48.5 |
e-value: 6e-06 |
Identity: 23.12% |
Span: 540bp (54.9%) |
Frame: 3 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G49760.1 |
score: 48.5 |
e-value: 6e-06 |
Identity: 22.17% |
Span: 624bp (63.4%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G16280.3 |
score: 48.1 |
e-value: 8e-06 |
Identity: 25% |
Span: 588bp (59.8%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At4G16280.2 |
score: 48.1 |
e-value: 8e-06 |
Identity: 25% |
Span: 588bp (59.8%) |
Frame: 3 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At2G35410.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 33.68% |
Span: 285bp (29.0%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At5G06210.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 36.36% |
Span: 231bp (23.5%) |
Frame: 3 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G61030.1 |
score: 47.8 |
e-value: 1e-05 |
Identity: 32.88% |
Span: 219bp (22.3%) |
Frame: 3 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At1G49760.1 |
score: 47 |
e-value: 2e-05 |
Identity: 22.16% |
Span: 555bp (56.4%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At1G11650.1 |
score: 47 |
e-value: 2e-05 |
Identity: 26.51% |
Span: 480bp (48.8%) |
Frame: 3 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917301 FORWARD |
| Match: At1G11650.2 |
score: 47 |
e-value: 2e-05 |
Identity: 26.51% |
Span: 480bp (48.8%) |
Frame: 3 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At1G49760.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 37.97% |
Span: 237bp (24.1%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G19610.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 28.77% |
Span: 429bp (43.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:10677675-10681633 FORWARD |
| Match: At5G54900.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 25.32% |
Span: 465bp (47.3%) |
Frame: 3 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At1G34140.1 |
score: 45.8 |
e-value: 4e-05 |
Identity: 25.64% |
Span: 555bp (56.4%) |
Frame: 3 |
| Symbols: PAB1 | PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor | chr1:12433334-124347... |
| Match: At2G16940.1 |
score: 45.4 |
e-value: 5e-05 |
Identity: 24.31% |
Span: 513bp (52.1%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr2:7349951-7354134 REVERSE |
| Match: At1G03457.1 |
score: 45.4 |
e-value: 5e-05 |
Identity: 28.87% |
Span: 273bp (27.7%) |
Frame: 3 |
| RNA-binding protein, putative | chr1:861109-864019 REVERSE |
| Match: At5G64200.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 34.67% |
Span: 222bp (22.6%) |
Frame: 3 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At4G03110.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 27.96% |
Span: 261bp (26.5%) |
Frame: 3 |
| RNA-binding protein, putative | chr4:1376612-1379275 REVERSE |
| Match: At1G17370.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 26.01% |
Span: 519bp (52.7%) |
Frame: 3 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At5G64200.2 |
score: 45.1 |
e-value: 7e-05 |
Identity: 34.67% |
Span: 222bp (22.6%) |
Frame: 3 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At4G03110.2 |
score: 45.1 |
e-value: 7e-05 |
Identity: 27.96% |
Span: 261bp (26.5%) |
Frame: 3 |
| RNA-binding protein, putative | chr4:1376710-1379275 REVERSE |
| Match: At2G23350.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 23.2% |
Span: 555bp (56.4%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At1G74230.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 40.58% |
Span: 198bp (20.1%) |
Frame: 3 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At5G61030.1 |
score: 45.1 |
e-value: 7e-05 |
Identity: 36.76% |
Span: 201bp (20.4%) |
Frame: 3 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At4G13860.1 |
score: 44.7 |
e-value: 9e-05 |
Identity: 42.03% |
Span: 204bp (20.7%) |
Frame: 3 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
|
| 95 lower scoring hits censored -- only 66 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|51969402|dbj|BAD43393.1| |
score: 201 |
e-value: 4e-50 |
Identity: 46.51% |
Span: 771bp (78.4%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|22328520|ref|NP_192643.2| |
score: 201 |
e-value: 3e-50 |
Identity: 46.51% |
Span: 771bp (78.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi38603886|gb|AAR24688.1| At4g09040 [Arabidops... |
| Match: gi|50946971|ref|XP_483013.1| |
score: 140 |
e-value: 9e-32 |
Identity: 46.2% |
Span: 510bp (51.8%) |
Frame: 3 |
| gi|50946971|ref|XP_483013.1| putative RNA-binding protein cp33 [Oryza sativa (japonica cultivar-group)] >gi|42408160|... |
| Match: gi|50928389|ref|XP_473722.1| |
score: 139 |
e-value: 1e-31 |
Identity: 37.86% |
Span: 684bp (69.5%) |
Frame: 3 |
| gi|50928389|ref|XP_473722.1| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] >gi|38346724|emb|CAE04874.2| O... |
| Match: gi|7267547|emb|CAB78028.1| |
score: 136 |
e-value: 1e-30 |
Identity: 47.09% |
Span: 513bp (52.1%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|15226983|ref|NP_181084.1| |
score: 133 |
e-value: 1e-29 |
Identity: 37.19% |
Span: 582bp (59.1%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi360814... |
| Match: gi|92878611|gb|ABE85149.1| |
score: 121 |
e-value: 5e-26 |
Identity: 33.2% |
Span: 753bp (76.5%) |
Frame: 3 |
| RNA-binding |
| Match: gi|51968436|dbj|BAD42910.1| |
score: 103 |
e-value: 1e-20 |
Identity: 42.55% |
Span: 423bp (43.0%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|15218972|ref|NP_176208.1| |
score: 100 |
e-value: 1e-19 |
Identity: 31.62% |
Span: 720bp (73.2%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|50915836|ref|XP_468382.1| |
score: 99.4 |
e-value: 2e-19 |
Identity: 37.78% |
Span: 537bp (54.6%) |
Frame: 3 |
| gi|50915836|ref|XP_468382.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi... |
| Match: gi|2104687|emb|CAA66479.1| |
score: 97.8 |
e-value: 6e-19 |
Identity: 37.43% |
Span: 552bp (56.1%) |
Frame: 3 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|558629|emb|CAA57551.1| |
score: 97.1 |
e-value: 1e-18 |
Identity: 36.36% |
Span: 552bp (56.1%) |
Frame: 3 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|50920707|ref|XP_470714.1| |
score: 95.5 |
e-value: 3e-18 |
Identity: 32.68% |
Span: 711bp (72.3%) |
Frame: 3 |
| gi|50920707|ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa] >gi|18921322|gb|AAL82527.1| putative ribonucle... |
| Match: gi|7267548|emb|CAB78029.1| |
score: 95.1 |
e-value: 4e-18 |
Identity: 40.71% |
Span: 420bp (42.7%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|50948431|ref|XP_483743.1| |
score: 94.4 |
e-value: 7e-18 |
Identity: 36.67% |
Span: 537bp (54.6%) |
Frame: 3 |
| gi|50948431|ref|XP_483743.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51965... |
| Match: gi|19754|emb|CAA43427.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 30.71% |
Span: 711bp (72.3%) |
Frame: 3 |
| gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] >gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa rib... |
| Match: gi|52076138|dbj|BAD46651.1| |
score: 92.4 |
e-value: 3e-17 |
Identity: 34.92% |
Span: 558bp (56.7%) |
Frame: 3 |
| gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] >gi|520761... |
| Match: gi|19708|emb|CAA46234.1| |
score: 92.4 |
e-value: 3e-17 |
Identity: 30.83% |
Span: 714bp (72.6%) |
Frame: 3 |
| gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] >gi|1350820|sp|P49313|ROC1_NICPL 30 kDa r... |
| Match: gi|3550483|emb|CAA11893.1| |
score: 92.4 |
e-value: 3e-17 |
Identity: 35.29% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] |
| Match: gi|34913270|ref|NP_917982.1| |
score: 90.9 |
e-value: 8e-17 |
Identity: 35.56% |
Span: 516bp (52.4%) |
Frame: 3 |
| gi|34913270|ref|NP_917982.1| putative ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|22296371|dbj|BAC1... |
| Match: gi|1015370|gb|AAA79045.1| |
score: 90.5 |
e-value: 1e-16 |
Identity: 34.24% |
Span: 540bp (54.9%) |
Frame: 3 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|3550467|emb|CAA06469.1| |
score: 90.1 |
e-value: 1e-16 |
Identity: 35.5% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|19750|emb|CAA37880.1| |
score: 89 |
e-value: 3e-16 |
Identity: 29.13% |
Span: 732bp (74.4%) |
Frame: 3 |
| gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris] >gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonu... |
| Match: gi|17064758|gb|AAL32533.1| |
score: 88.6 |
e-value: 4e-16 |
Identity: 28% |
Span: 702bp (71.3%) |
Frame: 3 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|2443390|dbj|BAA22411.1| |
score: 87.4 |
e-value: 9e-16 |
Identity: 34.91% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 87.4 |
e-value: 9e-16 |
Identity: 28% |
Span: 702bp (71.3%) |
Frame: 3 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|168526|gb|AAA33486.1| |
score: 87 |
e-value: 1e-15 |
Identity: 34.32% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|168526|gb|AAA33486.1| nucleic acid-binding protein |
| Match: gi|681912|dbj|BAA06523.1| |
score: 87 |
e-value: 1e-15 |
Identity: 28% |
Span: 702bp (71.3%) |
Frame: 3 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|16490|emb|CAA46347.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana] >gi|7269328|emb|CAB79387.1| RNA-binding protein R... |
| Match: gi|475719|gb|AAA18379.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|23505889|gb|AAN28804.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] >gi|15294254|gb|AAK95304.1| AT4g24770/F22K18_30... |
| Match: gi|3550485|emb|CAA11894.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 31.11% |
Span: 507bp (51.5%) |
Frame: 3 |
| cp33Hv [Hordeum vulgare subsp. vulgare] |
| Match: gi|681908|dbj|BAA06521.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|510240|emb|CAA43420.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|681906|dbj|BAA06520.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 33.16% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|19032260|emb|CAD18921.1| |
score: 85.9 |
e-value: 3e-15 |
Identity: 33.17% |
Span: 555bp (56.4%) |
Frame: 3 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|99029149|gb|ABF60862.1| |
score: 85.9 |
e-value: 3e-15 |
Identity: 37.28% |
Span: 504bp (51.2%) |
Frame: 3 |
| GRSF |
| Match: gi|17432522|gb|AAL39067.1| |
score: 85.9 |
e-value: 3e-15 |
Identity: 30.69% |
Span: 570bp (57.9%) |
Frame: 3 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|2330647|emb|CAA74889.1| |
score: 85.5 |
e-value: 3e-15 |
Identity: 34.59% |
Span: 546bp (55.5%) |
Frame: 3 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|15240641|ref|NP_199836.1| |
score: 84.3 |
e-value: 7e-15 |
Identity: 34.71% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 84.3 |
e-value: 7e-15 |
Identity: 33.14% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|21309|emb|CAA41023.1| |
score: 84.3 |
e-value: 7e-15 |
Identity: 33.14% |
Span: 504bp (51.2%) |
Frame: 3 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|50934311|ref|XP_476683.1| |
score: 84.3 |
e-value: 7e-15 |
Identity: 28.06% |
Span: 561bp (57.0%) |
Frame: 3 |
| gi|50934311|ref|XP_476683.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51978948|ref|X... |
| Match: gi|99565|pir||S15348 |
score: 84.3 |
e-value: 7e-15 |
Identity: 33.14% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|50899388|ref|XP_450482.1| |
score: 84 |
e-value: 1e-14 |
Identity: 30.49% |
Span: 702bp (71.3%) |
Frame: 3 |
| gi|50899388|ref|XP_450482.1| putative plastid-specific ribosomal protein 2 precursor [Oryza sativa (japonica cultivar... |
| Match: gi|20005|emb|CAA37879.1| |
score: 84 |
e-value: 1e-14 |
Identity: 30.21% |
Span: 546bp (55.5%) |
Frame: 3 |
| gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum] >gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucle... |
| Match: gi|21617920|gb|AAM66970.1| |
score: 83.6 |
e-value: 1e-14 |
Identity: 31.25% |
Span: 516bp (52.4%) |
Frame: 3 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|1054915|gb|AAA81023.1| |
score: 83.6 |
e-value: 1e-14 |
Identity: 34.22% |
Span: 555bp (56.4%) |
Frame: 3 |
| gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] |
| Match: gi|15228102|ref|NP_181259.1| |
score: 83.6 |
e-value: 1e-14 |
Identity: 31.25% |
Span: 516bp (52.4%) |
Frame: 3 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|92889382|gb|ABE89859.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 31.89% |
Span: 537bp (54.6%) |
Frame: 3 |
| RNA-binding |
| Match: gi|311952|emb|CAA41253.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 30.21% |
Span: 546bp (55.5%) |
Frame: 3 |
| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris] |
| Match: gi|19741|emb|CAA40364.1| |
score: 82.4 |
e-value: 3e-14 |
Identity: 32.14% |
Span: 582bp (59.1%) |
Frame: 3 |
| gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris] >gi|19756|emb|CAA37885.1| unnamed ... |
| Match: gi|475720|gb|AAA18380.1| |
score: 82.4 |
e-value: 3e-14 |
Identity: 37.75% |
Span: 450bp (45.7%) |
Frame: 3 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|19710|emb|CAA46233.1| |
score: 82 |
e-value: 4e-14 |
Identity: 26.52% |
Span: 732bp (74.4%) |
Frame: 3 |
| gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] >gi|1350821|sp|P49314|ROC2_NICPL 31 kDa r... |
| Match: gi|92887758|gb|ABE89041.1| |
score: 81.6 |
e-value: 5e-14 |
Identity: 29.43% |
Span: 657bp (66.8%) |
Frame: 3 |
| RNA-binding |
| Match: gi|14135|emb|CAA43428.1| |
score: 81.6 |
e-value: 5e-14 |
Identity: 27.05% |
Span: 636bp (64.6%) |
Frame: 3 |
| gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] >gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa rib... |
| Match: gi|19032262|emb|CAD18922.1| |
score: 79.7 |
e-value: 2e-13 |
Identity: 29.85% |
Span: 567bp (57.6%) |
Frame: 3 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|7578881|gb|AAF64167.1| |
score: 78.2 |
e-value: 5e-13 |
Identity: 29.17% |
Span: 555bp (56.4%) |
Frame: 3 |
| gi|7578881|gb|AAF64167.1| plastid-specific ribosomal protein 2 precursor [Spinacia oleracea] |
| Match: gi|388621|gb|AAA33039.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 32.62% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|20009|emb|CAA43429.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 29.83% |
Span: 513bp (52.1%) |
Frame: 3 |
| ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|50940527|ref|XP_479791.1| |
score: 74.7 |
e-value: 6e-12 |
Identity: 30.98% |
Span: 525bp (53.4%) |
Frame: 3 |
| gi|50940527|ref|XP_479791.1| putative RNA-binding protein RNP-D precursor [Oryza sativa (japonica cultivar-group)] >g... |
| Match: gi|30693595|ref|NP_566958.3| |
score: 73.6 |
e-value: 1e-11 |
Identity: 27.94% |
Span: 666bp (67.7%) |
Frame: 3 |
| gi|30693595|ref|NP_566958.3| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|17979394|gb|AAL... |
| Match: gi|8163877|gb|AAF73892.1| |
score: 73.2 |
e-value: 2e-11 |
Identity: 30.32% |
Span: 525bp (53.4%) |
Frame: 3 |
| gi|8163877|gb|AAF73892.1| enhancer binding protein-1; EBP1 [Entamoeba histolytica] |
| Match: gi|67471742|ref|XP_651783.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 29.79% |
Span: 525bp (53.4%) |
Frame: 3 |
| enhancer |
| Match: gi|39580770|emb|CAE58939.1| |
score: 70.9 |
e-value: 8e-11 |
Identity: 28.05% |
Span: 630bp (64.0%) |
Frame: 3 |
| gi|39580770|emb|CAE58939.1| Hypothetical protein CBG02207 [Caenorhabditis briggsae] |
| Match: gi|15223293|ref|NP_171616.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 29.71% |
Span: 495bp (50.3%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi169304... |
| Match: gi|79316226|ref|NP_001030925.1| |
score: 69.7 |
e-value: 2e-10 |
Identity: 29.55% |
Span: 495bp (50.3%) |
Frame: 3 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] |
| Match: gi|58532112|emb|CAE04116.3| |
score: 68.2 |
e-value: 6e-10 |
Identity: 32.37% |
Span: 372bp (37.8%) |
Frame: 3 |
| OSJNBa0009P12.1 |
| Match: gi|50948433|ref|XP_483744.1| |
score: 67.4 |
e-value: 9e-10 |
Identity: 36.89% |
Span: 366bp (37.2%) |
Frame: 3 |
| gi|50948433|ref|XP_483744.1| nucleic acid-binding protein-like [Oryza sativa (japonica cultivar-group)] >gi|42407940|... |
| Match: gi|49652564|emb|CAG84877.1| |
score: 66.6 |
e-value: 2e-09 |
Identity: 28% |
Span: 552bp (56.1%) |
Frame: 3 |
| gi|49652564|emb|CAG84877.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50409715|ref|XP_456900.1| unna... |
| Match: gi|34555650|gb|AAQ74973.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 31.64% |
Span: 504bp (51.2%) |
Frame: 3 |
| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica Group] |
| Match: gi|49526568|emb|CAG60192.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 26.8% |
Span: 459bp (46.6%) |
Frame: 3 |
| unnamed |
| Match: gi|49657746|emb|CAG90562.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 29% |
Span: 567bp (57.6%) |
Frame: 3 |
| unnamed |
| Match: gi|34555648|gb|AAQ74972.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 31.64% |
Span: 504bp (51.2%) |
Frame: 3 |
| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica Group] |
| Match: gi|34555646|gb|AAQ74971.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 31.64% |
Span: 504bp (51.2%) |
Frame: 3 |
| gi|34555646|gb|AAQ74971.1| flowering time control protein isoform rFCA-3 [Oryza sativa (indica cultivar-group)] |
| Match: gi|50898640|ref|XP_450108.1| |
score: 66.2 |
e-value: 2e-09 |
Identity: 31.64% |
Span: 504bp (51.2%) |
Frame: 3 |
| flowering |
| Match: gi|111056352|gb|EAT77472.1| |
score: 65.5 |
e-value: 4e-09 |
Identity: 27.71% |
Span: 480bp (48.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|71993203|ref|NP_001021709.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 26.7% |
Span: 630bp (64.0%) |
Frame: 3 |
| PolyA |
| Match: gi|32482392|gb|AAP84385.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 30.16% |
Span: 540bp (54.9%) |
Frame: 3 |
| gi|32482392|gb|AAP84385.1| FCA protein [Triticum aestivum] |
| Match: gi|71993217|ref|NP_001021711.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 26.7% |
Span: 630bp (64.0%) |
Frame: 3 |
| PolyA |
| Match: gi|71993209|ref|NP_001021710.1| |
score: 65.1 |
e-value: 5e-09 |
Identity: 26.7% |
Span: 630bp (64.0%) |
Frame: 3 |
| PolyA |
| Match: gi|91095035|ref|XP_975939.1| |
score: 64.7 |
e-value: 6e-09 |
Identity: 28.44% |
Span: 600bp (61.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|91095037|ref|XP_975975.1| |
score: 64.7 |
e-value: 6e-09 |
Identity: 28.44% |
Span: 600bp (61.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|91095031|ref|XP_966522.1| |
score: 64.7 |
e-value: 6e-09 |
Identity: 28.44% |
Span: 600bp (61.0%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|70983602|ref|XP_747328.1| |
score: 64.7 |
e-value: 6e-09 |
Identity: 25.71% |
Span: 735bp (74.7%) |
Frame: 3 |
| nucleic |
| Match: gi|68473894|ref|XP_719050.1| |
score: 64.3 |
e-value: 8e-09 |
Identity: 29.17% |
Span: 480bp (48.8%) |
Frame: 3 |
| putative |
| Match: gi|70996384|ref|XP_752947.1| |
score: 63.9 |
e-value: 1e-08 |
Identity: 29.17% |
Span: 558bp (56.7%) |
Frame: 3 |
| RNA |
| Match: gi|4678944|emb|CAB41335.1| |
score: 63.9 |
e-value: 1e-08 |
Identity: 26.77% |
Span: 666bp (67.7%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|295899|emb|CAA51460.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 26.59% |
Span: 519bp (52.7%) |
Frame: 3 |
| gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis] >gi|422617|pir||S32644 nucleolin - African clawed frog |
| Match: gi|780291|gb|AAA65224.1| |
score: 63.5 |
e-value: 1e-08 |
Identity: 26.24% |
Span: 630bp (64.0%) |
Frame: 3 |
| gi|780291|gb|AAA65224.1| polyadenylate-binding protein |
| Match: gi|39580770|emb|CAE58939.1| |
score: 60.1 |
e-value: 1e-07 |
Identity: 30.06% |
Span: 489bp (49.7%) |
Frame: 3 |
| gi|39580770|emb|CAE58939.1| Hypothetical protein CBG02207 [Caenorhabditis briggsae] |
| Match: gi|71993203|ref|NP_001021709.1| |
score: 57.8 |
e-value: 7e-07 |
Identity: 29.48% |
Span: 489bp (49.7%) |
Frame: 3 |
| PolyA |
| Match: gi|91095037|ref|XP_975975.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 28.49% |
Span: 486bp (49.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|91095035|ref|XP_975939.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 28.49% |
Span: 486bp (49.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|91095031|ref|XP_966522.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 28.49% |
Span: 486bp (49.4%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|20009|emb|CAA43429.1| |
score: 52.8 |
e-value: 2e-05 |
Identity: 36.99% |
Span: 219bp (22.3%) |
Frame: 3 |
| ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|50928389|ref|XP_473722.1| |
score: 52.4 |
e-value: 3e-05 |
Identity: 34.21% |
Span: 228bp (23.2%) |
Frame: 3 |
| gi|50928389|ref|XP_473722.1| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] >gi|38346724|emb|CAE04874.2| O... |
| Match: gi|50920707|ref|XP_470714.1| |
score: 52 |
e-value: 4e-05 |
Identity: 36.05% |
Span: 258bp (26.2%) |
Frame: 3 |
| gi|50920707|ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa] >gi|18921322|gb|AAL82527.1| putative ribonucle... |
| Match: gi|49657746|emb|CAG90562.1| |
score: 51.2 |
e-value: 7e-05 |
Identity: 27.45% |
Span: 456bp (46.3%) |
Frame: 3 |
| unnamed |
| Match: gi|50899388|ref|XP_450482.1| |
score: 50.8 |
e-value: 9e-05 |
Identity: 37.5% |
Span: 240bp (24.4%) |
Frame: 3 |
| gi|50899388|ref|XP_450482.1| putative plastid-specific ribosomal protein 2 precursor [Oryza sativa (japonica cultivar... |
|
| 320 lower scoring hits censored -- only 100 best hits are stored. |
