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Unigene SGN-U291141

Unigene Basic Information

Unigene ID:	SGN-U291141
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	291141
mRNA sequence:	Length: 312 bp

>SGN-U291141 Solanum tuberosum #4 (1 members)
TCATCTACAGTAGTAATCGAATGTGAAAATATTGCGAGTAATGAGCTCGTTTGGAGATCACTTTCAGGAGATGGAACTGAGTCTGCTCAA
GCTTGGTTGACATATCTTAATTTTCCAGAGGAACATGCACATTCTGAAAAGGCTTACCAAGTAAAGAACATGTTGATTTGAAAAATGAAG
GGAAGATCTCTTGGAGTGATGAAAGTTTCTGCACTCATGACGCCCAGTTTCTTGAGTCAGTTCTGGTTAACTTGTTCCATCTAGAAAGAA
CCAAGATAGATGAAACAGTGGTGGACTATCAGTGGAATATAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1

mRNA member sequences (1)

To view details for a particular member sequence, click the SGN-E# identifier.
[Hide Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P233294 (60 Aa)

PELTQETGRHECRNFHHSKRSSLHFSNQHVLYLVSLFRMCMFLWKIKICQPSLSRLSSIS

SignalP predicts non-secretion with a score of 0.148

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P89508 (105 Aa)

SSTVVIECENIASNELVWRSLSGDGTESAQAWLTYLNFPEEHAHSEKAYQVKEHVDLKNEGKISWSDESFCTHDAQFLESVLVNLFHLER
TKIDETVVDYQWNIX

SignalP predicts non-secretion with a score of 0.039

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1095	PPTA	17
2	31068		2
5	66327		2
1.1	102418	Protein prenyltransferase alpha subunit - Molecular Function: protein prenyltransferase activity (GO:0008318) - Biological Process: protein amino acid prenylation (GO:0018346) Protein prenyltransferase	14
2	123669	Leucine-rich repeat Protein prenyltransferase alpha subunit - Molecular Function: protein prenyltransferase activity (GO:0008318) - Biological Process: protein amino acid prenylation (GO:0018346) Protein prenyltransferase	4
5	133837	Leucine-rich repeat Protein prenyltransferase alpha subunit - Molecular Function: protein prenyltransferase activity (GO:0008318) - Biological Process: protein amino acid prenylation (GO:0018346) Protein prenyltransferase	4

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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