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This unigene is from an out-of-date build, Coffea canephora #1
It has been superseded by SGN-U618866 in the current build, Coffea canephora #3

Unigene SGN-U305890

Unigene Basic Information

Unigene ID:	SGN-U305890
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	132599
mRNA sequence:	Length: 228 bp

>SGN-U305890 Coffea canephora #1 (1 members)
GGCCAAGTGCGAATTCGCTGTGTACCACCACTTTGGTTTGGTTGCTTGATGCAAGACACACTGAATTTATGGTCTTTTAAAATTGTCATA
AATTTTTAGAACTTTTTACGAATGAAAATCCACAACCTCCATAAAGCTCTCCGCCTTTGGACTAATCAGAAATATCAATCTTGGCCTTTT
GATCTAACAATGATCATAAACGACGTTTTAGCCGTCAAACCCTGTCTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccl	LeafB Young	11655	1

mRNA member sequences (1)

To view details for a particular member sequence, click the SGN-E# identifier.
[Hide Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P108036 (43 Aa)

MIINDVLAVKPCLAPNRNSNPDQVSALESPTNPLKNGICDHFP

SignalP predicts non-secretion with a score of 0.12

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	# Members
1.2	9711	1
2	37060	1
5	74273	1

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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