Sol Genomics Network

Unigene SGN-U563323

Unigene Basic Information

Unigene ID:	SGN-U563323
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1578 bp

>SGN-U563323 Tomato 200607 #2 (23 members)
GAAATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAG
ATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTG
CTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGGCGACATTTGGTG
AAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAG
CAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAG
GATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGCTAGATGAATGGGTGC
TTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGA
CTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCA
AGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCC
CAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCA
ACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAA
ATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCC
AATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGT
ATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAA
ATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGG
CACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATA
TGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATT
TTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ja2	jasmonic acid 2

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 4 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U317043	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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