Sol Genomics Network

Unigene SGN-U577458

Unigene Basic Information

Unigene ID:	SGN-U577458
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1232 bp

>SGN-U577458 Tomato 200607 #2 (25 members)
ATACAAAAAGTAGTCTCCATTTTATTTATTTCAGAAATATAACAACGAGTGCTCTTCCATATTTGATTCATACATACATAATACATACAA
ACAACATACACACAGTTGATTTTGCGAAGCAAAAGTACTGTCAGGCGAAAAAAAAAAAAAGGAAGGAAATTGTGAGGGCCAAATGGTAAT
TGAATTAAGTTCATACGGAAAGAGGAGGAGAAAGACCGAACTCAAGTCCCCACAGCTCAAATCCACCCTTCACGAAATCATAGTAACCTC
CCTTCAATGCCAATGTTTTCTTCACCAATCCTTCTCTCACGAATGGATACGTAAGCAGATTTCCAAGTGAAACGTTCACAGCTTCCTTCT
CACAAGCTGTGCATTGATGTGCAAATTCTTTCCCTCCGTGATCGGCCAGAACCTTTGCCTTGGCAGGTAAACAAATTTTTACCCAATCCT
CAATAAAGGCAGTTGATTCACTACCATCTTCAGGTAGTGGTTTCACTCTCTCGAGTTCGTCCTGTTAGCTGTGAGTGCTTCAAGTTTGTT
GAGAGGATGAAGAGGGCAATGCCATGGAGTGATGATGAAGAAGACGATTCATCCTCCGATGACGAATCTTCAGCAATTGATACTGATAAT
GAAGACTATTCGGGGTCTACCAACATCAAACCTAATGCTTCTTCCTCCAAACATAAAGCTGAATCTGCAAAGCGGAAGAGCAAAGGTGTG
GACTTTGACGCTCTAAGCCGACACGGGTACAGAGGTGGATTATCTGTCTTGAAAGTTCCACCACCCAAGGAACCGGATCAGGAACAGAAT
TGGTCTTGGTCAAGTGGGAAGGAAACCCGGGAAAAAGAGAAGGAAGAAACTTATGAGGAGCGTCAGAAGACGAGGGCTGCACTAGCGGAA
GCAGAGGAACTTGTTCATGCACGAACTAAAAAAGAGAGGAAGAACTTTTCTTTCTCACAGAAGGAGAAGAGGAAGAGAGATCTTGGTCAG
GCTAGCAGAGGGAAGAGTTACGTTGAAGAGGAAAAGAGGCTGCTAAGAGATAATGGCGTTTACTCTGGATTTGATTCCTGATTCTCAAGC
TGTTTTTTTTAGCAGTTTTATCATGTAAAAGTTAGTAATGACTACTGCGCAGACGCTATATCTATAAATATTAGCATCAAAACGAATGTA
TGATACCTCCATTTGTCATTGCACGAGTATCAACCGATAAATCTAATCAAACTTGATGGTCG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ca2	chloroplast carbonic anhydrase	chloroplast carbonic anhydrase

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEE	seeds and maturing carpels 5 days post-anthesis to fruit over-ripe stage	547	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	5
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	5
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (4)

Unigene	Build
SGN-U312688	Tomato 200607 #1
SGN-U312689	Tomato 200607 #1
SGN-U322422	Tomato 200607 #1
SGN-U333832	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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