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Unigene SGN-U207318

Unigene Basic Information

Unigene ID:	SGN-U207318
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	207318
mRNA sequence:	Length: 161 bp

>SGN-U207318 Solanum melongena #2 (1 members)
CAAGAATATGCAACCGACATTGACCACTTTCCAGGCTAAAGAAGTCATAATGGATGCTAGCTTTCAGAGTATGCATTGGCACATCTGTGT
CCAACGATTTTCCTGCACATTAGTTTTGACCCAAGATAAAGATGACAAATTTCATGACTTCAATCTTATTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E518898
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P209787 (53 Aa)

KNMQPTLTTFQAKEVIMDASFQSMHWHICVQRFSCTLVLTQDKDDKFHDFNLI

SignalP predicts non-secretion with a score of 0.092

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30837 (54 Aa)

KNMQPTLTTFQAKEVIMDAAFRVCIGTSVSNDFPAXLVLTQDKDDKFHDFNLIX

SignalP predicts non-secretion with a score of 0.132

No InterPro domain matches or not analyzed.

Gene Family (4)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	170	Patatin	82
2	39498		1
5	77402		1
1.1	101563	Patatin - Biological Process: lipid metabolism (GO:0006629)	73

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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