Sol Genomics Network

Unigene SGN-U270623

Unigene Basic Information

Unigene ID:	SGN-U270623
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270623
mRNA sequence:	Length: 1391 bp

>SGN-U270623 Solanum tuberosum #4 (5 members)
ATAGTGTGAGATTTCTAAAATGAGGAGCTTTACTTTCTTTTGCCTATCCATGGTGATGATAGCGAAGATTTTGCTCTCTGCTTCTTCGGT
GACACACGGGACGATGATCGTTGATAGGCAGTGGAACGGCACCGGAGAAATGGATGGTATTAATTGGCAGGTTAGTCTTGCAGGTGGTGG
AAATTACTTGTCTTTCAAAGTTATTAACGATAAGCCGCCGATCTGCAACGAGAAAGTGTACGGGAATTGCATAGGGGACAAGAAGCCTGG
GCAACGGCCATGTACCTACTACAATAACTGCAAGCGTTCTCCAGGTTAAAACTGAATCTATGAAGTTAAAGTGACTTTAGAGTGATTTCT
CTACCTATAAATAGGGTTATCATTTACCCTTATAAGTGACACGAGAAGACATTTGAATAAAGATGATCTCTTGTCTATATATCTTTTATA
TTACTTATGTTTTATAAGGAGCTAGGGGAGGGGTATTGTTAATTTCTGTTACTACATCTTATAGTGGCCAAAAAGAAATGTGTGTGTGGC
TGCTGGACGTGGAATTCTCACCACTAAACTACAATCACTCTCTGTGTTCATGATAATGATTATAAATTGATTAAGTTATGTAAATGAACA
TAACCTGTGTGTAAAAAAAAAAAAAAAAAAAAAAAAACGCGAGACTAGTTCAAGGTTTTGAGCAATGGCGGCTCTACAGAGCTCCTTTAC
TGGTCTCTCTATCTCCTCCACCTCCTTCTTCGGCCAACGCTTCTCTCCTCCTCTCTCCTTTCCTCTGGTTAAATCAACAGAAGGTCCATG
TTTGATTACAGCAAAGCTTAAGCGATGGGAGCGTAAAGAATGTAAGCCAAACAGCCTTCCAGTACTACACAAAATGCATGTAAGGCTGGG
TGATACTGTAAAGGTAATATCCGGCCATGACAAAGGTAAAATCGGAGAGATCACCGAGATCATCAAGCACAACAGCAAAGTAGTAGTAAA
AGAGGTGAACTTGAAAACCAAGCATGTGAAGAGTCGGAGTGAGGAGGAACCAGGCCAGATAGTCAAGGTTTTATCTCGACTTCTCTCTTC
TCTAACTCATCTGAAAATTGTTATCTTGAGCTTTACATTTCGTCGTGGCTAGCATTGAATTCATCTTTGCCCTACCAAGAAAGAAAAATT
TGTATTAACATTTCAGATTGAAACTCCTCAACTTGTTTGGACTGAGACGTAGTTGTTGTTGTTTCAGATTGAAGCTCCTATTCACAGCTC
AAACGTGATGCTTTACTCAAAAGACCAGAAGGTAACCAGTCGGGTGGGCCACAAAACGTTAGACAATGGAAAAAGAGTCCGGTACCTCAT
TAAAACTGGGGAAATCATCGATAGTGCAGAGAACTGGAAGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	MXFL	Floral buds	6603	3
Solanum tuberosum	STOL	Stolon	6462	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1734	KOW Ribosomal_L24 Ribosomal_L24_26 Ribosomal_L26e/a	11
2	25802	KOW Ribosomal_L24 Ribosomal_L24_26 Ribosomal_L26e/a	6
5	59784	KOW Ribosomal_L24 Ribosomal_L24_26 Ribosomal_L26e/a	6
1.1	102723	KOW (Kyrpides Ouzounis Woese) motif Ribosomal protein L24/L26 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) Ribosomal protein L24 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) Translation protein SH3-like KOW	11
2	122750	Ribosomal protein L24/L26 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) KOW Translation protein SH3-like KOW (Kyrpides Ouzounis Woese) motif Ribosomal protein L24 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	5
5	132933	Ribosomal protein L24/L26 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) KOW Translation protein SH3-like KOW (Kyrpides Ouzounis Woese) motif Ribosomal protein L24 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	5

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U264334	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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