Sol Genomics Network

Unigene SGN-U270816

Unigene Basic Information

Unigene ID:	SGN-U270816
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270816
mRNA sequence:	Length: 788 bp

>SGN-U270816 Solanum tuberosum #4 (6 members)
TAACAGTATCTTGAGCCAATTAAGCTAAATGATGTCCAGGTTGATTGGAAGTCAATGGACCTAAGTTACCTTTTGGAGGACAACTATGTG
AAACACTTTGGCGACTTGGTTAAAAAGGCTAAGCCCATCCACGGAGCTGATGCTGTTTTGAAAGCATTTAACATAGATGGTGATGTGCGT
ATTCAGTACAGAGACCAACTAGACTTTGAAGCTATCGCTCGACAGTTTGGCATTTTTGAAGAATGGAAGGATGGTGTACCACGGGCAGCA
TATAAAGGGATAGTAGTTTTCCGGTTTCAAACATCTAGACGTGTGTTCCTTGTTGCCCCTGATTCTCTTCGACAACTTGGAGTTGAAGAT
ACTTAGCGAAGATATGATTGGAGCCTGAGCAACAATTTAGACTTATTTGGTAGGATACATTGGAAAGAGCTGACACGAAAAGTATGACTA
CCAGTAGCTACATGCAACATTTTAATGTTAATGGAAGGAACCCACTGCTTATTGTTGGAATGGATGAATCATCACCACATCCTATTATTC
AAGTTTTACAAACATAAAGAGGAAATGTAGCCCTATAAACACAATGTTTTTGTTTCTAAGAAGGAACGTTACGATTTTGAGCAACTTTGA
AGAAATGTGAGCACTGACGTTTTAGTTTTGAGATTTAACCTTAAAATCACATTATAAGTACTCAAACGTGATTTATTTATGTCCGAGGCA
CCCTTTCTATACATTATGATTGAAGAGTGGGGGAAACATGCTCGAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
gnt1	N-acetylglucosaminyltransferase 1	N-acetylglucosaminyltransferase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1838	Glyco_trans_8 Glyco_trans_2 Glyco_trans_13	10
2	23891	Glyco_trans_8 Glyco_trans_2 Glyco_trans_13	10
5	57955	Glyco_trans_8 Glyco_trans_2 Glyco_trans_13	10
1.1	103136	Glycosyl transferase family 13 - Cellular Component: Golgi membrane (GO:0000139) - Molecular Function: alpha-1 3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity (GO:0003827) - Biological Process: protein amino acid N-linked glycosylation (GO:0006487)	8
2	120812	Glycosyl transferase family 13 - Cellular Component: Golgi membrane (GO:0000139) - Molecular Function: alpha-1 3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity (GO:0003827) - Biological Process: protein amino acid N-linked glycosylation (GO:0006487)	8
5	131062	Glycosyl transferase family 13 - Cellular Component: Golgi membrane (GO:0000139) - Molecular Function: alpha-1 3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity (GO:0003827) - Biological Process: protein amino acid N-linked glycosylation (GO:0006487)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U245673	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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