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This unigene is from an out-of-date build, Coffea canephora #1
It has been superseded by SGN-U629007 in the current build, Coffea canephora #3

Unigene SGN-U312163

Unigene Basic Information

Unigene ID:	SGN-U312163
Unigene Build:	Coffea canephora #1
Date:	2005-04-24
Organism:	C.canephora
Alternative ID:	131970
mRNA sequence:	Length: 135 bp

>SGN-U312163 Coffea canephora #1 (1 members)
GGTTTAACAAGTACTATGAAGAAGAGAAACGTTATGCAACCAACATTTCTCAACTTACTTCACAGAGCGGTTATTCTTCGGGAAGCAGCG
ATACATACAGTACTCAACAAATTTCTGAAGATAATTCTAGCGGTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs18w	Edorsperm and perisperm 18 week after pollination	1972	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E635490
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (1)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P108152 (80 Aa)

FNKYYEEEKRYATNISQLTSQSGYSSGSSDTYSTQQISEDNSSGAFSGIWPIKLRLKITGHDGCEKLDIQIPVGFLEGIT

SignalP predicts non-secretion with a score of 0.027

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	942	Isocit_lyase_ph	20
2	23957	Isocit_lyase_ph	10
5	58613	Isocit_lyase_ph	8

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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