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Unigene SGN-U591872

Unigene Basic Information

Unigene ID:	SGN-U591872
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 183 bp

>SGN-U591872 Tomato 200607 #2 (1 members)
GTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATT
GCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAGGGCTGGGGCACTCTCTTCTTCTTCTTC
TAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ca2	chloroplast carbonic anhydrase	chloroplast carbonic anhydrase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E345097
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P682461 (40 Aa)

MSTASINNCLTLSPAQASLKKPTRPVAFAXAGALSSSSSX

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P723648 (45 Aa)

RKLIEKCQLLPLTIALLSPLLKLPLRNLLVPLPSQGWGTLFFFFY

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312689	Tomato 200607 #1

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