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Unigene SGN-U624829

Unigene Basic Information

Unigene ID:	SGN-U624829
Unigene Build:	Coffea canephora #3
Date:	2010-04-15
Organism:	C.canephora
Alternative ID:	none
mRNA sequence:	Length: 198 bp

>SGN-U624829 Coffea canephora #3 (1 members)
GAGCAAATCAAAATTTGCCTCCACCCCAATCTTGGGGCCCTCCAACTCAAGGATTTCCAATGAATGCTGGCCGTGGCACCTGGTTATGGG
GCCCCTCCTCAATACATGCCACCTCCACGCCCATATGACAACTATTACCCACCAACTGATGTGCCGCCTCTGGATAAGCAACCTCGTCCT
GAACATCCTGCTTTTGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccp	Pericarp All development stages combined	10473	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E641243
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (3)

Prediction based on longest six frame method

>SGN-P791453 (66 Aa)

SKSKFASTPILGPSNSRISNECWPWHLVMGPLLNTCHLHAHMTTITHQLMCRLWISNLVLNILLLG

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P775216 (66 Aa)

XANQNLPPPQSWGPPTQGFPMNAGRGPGYGAPPQYMPPPRPYDNYYPPTDVPPLDKQPRPEHPAFG

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P791454 (66 Aa)

PKSRMFRTRLLIQRRHISWWVIVVIWAWRWHVLRRGPITRCHGQHSLEILELEGPKIGVEANFDLL

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U362689	Coffea canephora #2

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