Sol Genomics Network

Unigene SGN-U196016

Unigene Basic Information

Unigene ID:	SGN-U196016
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196016
mRNA sequence:	Length: 2347 bp

>SGN-U196016 Capsicum annuum #1 (27 members)
CCCTCTTGTGTTTCTTCTTCTTCGTAGTAGCAGGCAATAACAACAGTAAAATGGCGGATTCAGAGACGTTTGCTTTCCAAGCTGAGATCA
ATCAGCTGCTCAGTCTTATTATCAATACTTTCTACAGTAACAAGGAGATCTTTCTTCGTGAACTTATCAGCAATTCTTCCGATGCTCTTG
ACAAGATCCGTTTTGAGAGCTTGACTGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTATCCCTGACAAGACCAACA
ATACCCTCACTATCGTTGACAGTGGTGTTGGTATGACAAAGGCTGATCTGGTGAACAACCTGGGTACAATTGCGAGGTCAGGAACTAAGG
AATTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGGCAATTTGGTGTTGGTTTCTACTCTGCTTACTTGGTAGCTGAGA
AGGTTCTTGTGACCACAAAGCATAATGATGATGAACAATATGTGTGGGAGTCGCAAGCTGGTGGTTCTTTCACTGTAACCAGGGATACAT
CTGGTGAGAACCTTGGTAGGGGTACAAAAATTGTCCTGTTCCTCAAGGAAGACCAACTTGAATACCTTGAAGAACGTAGGCTCAAGGACC
TGATTAAGAAGCACTCTGAGTTCATCAGCTACCCCATCTCTCTGTGGGTTGAGAAAACCATAGAAAAGGAAATTTCTGATGATGAGGAGG
AAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAAGAGGTTGATGAAGAAAAGGAGAAGGAAGAAAAGAAAAAGAAAAAGGTTAAAGAAG
TTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCCATTTGGATGAGGAAGCCTGAAGAGATCACAAAGGAAGAGTATGCTGCTTTCT
ATAAGAGTTTGACTAATGACTGGGAGGAGCATTTGGCTGTGAAGCACTTCTCTGTTGAGGGCCAGTTGGAGTTCAAGGCTGTCCTTTTTG
TTCCAAAAAGAGCTCCTTTTGACCTCTTTGATTCAAGGAAGAAGCCCAACAATATCAAGCTCTATGTTCGTCGTGTGTTTATTATGGACA
ACTGTGAGGAGTTGATGCCTGAATATTTGAGCTTTGTGAAGGGCATTGTGGATTCTGAGGACCTTCCTCTTAACATCTCTAGAGAGATGT
TGCAGCAGAACAAGATCCTGAAGGTTATTCGCAAGAATTTGGTGAAAAAGTGTGTTGAGCTGTTCTTTGAAATTGCTGAGAACAAAGAGG
ATTATAACAAGTTTTATGAGGCCTTCTCTAAGAACCTAAAGCTTGGCATCCATGAGGATTCTCAGAACAGGTCTAAGTTTGCTGAATTGC
TGCGTTACCACTCCACCAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAATGATATCTACT
ACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAATTCCCCCTTCCTTGAGAAACTGAAAAAGAAGGGCTATGAGGTGCTTTACATGGTTG
ATGCCATTGATGAGTATTCAATTGGTCAGTTGAAAGAATTTGAGGGCAAAAAGCTTGTTTCTGCTACCAAGGAAGGTCTCAAGCTTGATG
AGAGTGATGATGAGAAGAAAAAGAAGGAAGAATTGAAGGAAAAGTTTGAGGGACTGTGCAAGGTCATGAAGGATGTGCTAGGAGATAAGG
TCGAGAAGGTTATTGTTTCTGACCGTGTTGTGGACTCTCCCTGCTGTTTGGTCACTGGAGAGTATGGCTGGACTGCTAACATGGAGAGAA
TCATGAAGGCACAGGCACTTAGGGACTCTAGCATGTCTGGATACATGTCCAGCAAGAAGACCATGGAGATCAACCCAGAGAACTCCATCA
TGGATGAGCTGAGGAAGAGGGCCGATGCAGACAAGAATGACAAGTCTGTGAAGGACTTGGTTCTCCTGCTGTTCGAGACTGCCCTTCTCA
CATCAGGTTTCAGCCTTGAGGAGCCAAACACCTTTGGCAACAGAATTCACAGGATGCTGAAACTTGGTTTGAGCATTGATGAAGAAGGCG
GAGATGCAGACGTTGACATGCCACCATTGGAGGATCCTGAAGCTGATGCTGAGGGCAGCAAGATGGAGGAGGTCGATTAAGTCATTAGTT
AAATGGTTGATATTCTATGGTTCCTTTAGTATTCTCTAGTTTTTGTTTTACCTCATCAGGAAACAATATGTAAGATTTTAATGCCATTCG
TTCAGAGTGGTAGTTCAATGTAGGTTATAATGCTCTTTCTGTCTTGACATTCGCGGTTACTATACTTATTTTCTTGCCCCAAAAAAAAAA
AAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
hsp80	heat shock protein 80

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	6
Capsicum annuum	KS07	Flower bud	4235	5
Capsicum annuum	KS08	Anther	2304	1
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	4
Capsicum annuum	KS11	Early root	2168	5
Capsicum annuum	KS12	Placenta	4279	6

mRNA member sequences (27)

Alignment image suppressed for unigene with 27 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	181	Hsp90 ATPbind_ATPase	79
2	22083	Hsp90 ATPbind_ATPase	74
5	56336	Hsp90 ATPbind_ATPase	73
1.1	101540	Heat shock protein Hsp90 - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) ATP-binding region ATPase-like - Molecular Function: ATP binding (GO:0005524) Four-helical cytokine	81
2	118502	Heat shock protein Hsp90 - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) ATP-binding region ATPase-like - Molecular Function: ATP binding (GO:0005524) Four-helical cytokine	77
5	128990	Heat shock protein Hsp90 - Biological Process: protein folding (GO:0006457) - Molecular Function: unfolded protein binding (GO:0051082) ATP-binding region ATPase-like - Molecular Function: ATP binding (GO:0005524) Four-helical cytokine	76

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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