Sol Genomics Network

Unigene SGN-U196066

Unigene Basic Information

Unigene ID:	SGN-U196066
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196066
mRNA sequence:	Length: 1860 bp

>SGN-U196066 Capsicum annuum #1 (38 members)
CTGCGTAACATTATCTTTTTATAGCTTATTGTATACTCTTTGTCCTCCAAATTTCTAGGGTTTCTTACCGAATAATTTTCTATTTGAGAA
CGTGATTTGGGAGTAAAACAATTGGATTTGGAATCGGAACAAATTTCAATTATTTAATATTGTGAATGATCTAATGGAGTCAAAAGGTGG
TAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGAGGAGTGAA
GAAGTTCAGATCTGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTCCCTAATCTTCCATCGTTTAAGGCGTCAATAGACGCA
GCTGAAAAAAAAACAAAAAAAATTTCTGCTTTCATTTTCTTTCGTTGTCAAGCCCTCACTCCTTTTCTTCCTTCCTTTACTTCTTTCCTG
CTTTTGCGCTCATTGCTCTCAACATTTCTGCTTTAACTTTCTTTGCTGCTGTGAACATCTTTCATAATGGAAATGGACTTGCCAGTTTCT
GCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTTGCCGAGCCTGGTTTGTTTGCTGATCCTAACGGAAAAGGACTTCGA
TCTCTCTCGAAGGCACAATTGGATGAAATTCTCGGACCTGCTGAGTGCACAATTGTTGATAACCTATCAAATGCTGATGTTGACTCCTAT
GTCCTCTCCGAGTCGAGCCTCTTTGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTCGCAATTCCGCCC
ATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTTCAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTT
CCTCACCGTCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGCTATTTTGGGAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAAT
CCTGACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGCCTGTTCAGTCCAATGTCCCTGTTTACACTCTCGAGATGTGCATG
ACTGGTTTGGACAGGGAGAAGGCATCTGTCTTTTACAAGACTGAAGGAAGCTCGGCTGCTCACATGACTGTTAAATCTGGCATAAGGAAG
ATCCTCCCCAACTCTCAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCCATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATT
CACATTACCCCAGAAGATGGCTTTAGCTATGCTAGCTTTGAATCAGTTGGATATGATCCTAAAACCGTGGAGTTGGGTCCCCTGGTTGAG
AGAGTGCTAGCATGTTTCGAGCCAGCTGAGTTCTCTATTGCTTTGCATGCTGATGTTGCTGCCAAGTTACTGGAGCGTGTTTGCTCTATT
GATGTTAAGGGCTACTCTCTTGCTGAGAGGAGTCCAGAAGAATTTGGCAAGGGCGGTTCCATTGTCTACCAGAAGTTCACTAGGACTCCT
TACTGTGGATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAAGAAGAATCGAAAGAGGAAAAGGAGTAGTGTTGTCTTGAGGGTCGTTTT
GTTGTTCTTGTTTTAGCGTCTGTTGTTTGCTTATGTTTTCCCTGTTTTTCCGAATAAAGGACTTATATGTCCAAACTCAAGTGTCTGTCG
GATTTGTACCGATTGTGTGCAAATTCTGAACTAGTTTAGTCTTTTGGTGTTTCACCAGAAGCCTTGTGTGTCTGCATTTTGAATTGTTCC
TGTTGGTTGTCTCTTCAGTTGTCTAATAAAAGTTTGTTGTGTGTAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	6
Capsicum annuum	KS07	Flower bud	4235	8
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	5
Capsicum annuum	KS10	Hairy root	2179	4
Capsicum annuum	KS11	Early root	2168	4
Capsicum annuum	KS12	Placenta	4279	11

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	493	SAM_decarbox	36
2	22338	SAM_decarbox	34
5	56524	SAM_decarbox	34
1.1	101790	S-adenosylmethionine decarboxylase - Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014) - Biological Process: spermine biosynthesis (GO:0006597) - Biological Process: spermidine biosynthesis (GO:0008295)	37
2	118684	S-adenosylmethionine decarboxylase - Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014) - Biological Process: spermine biosynthesis (GO:0006597) - Biological Process: spermidine biosynthesis (GO:0008295)	36
5	129148	S-adenosylmethionine decarboxylase - Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014) - Biological Process: spermine biosynthesis (GO:0006597) - Biological Process: spermidine biosynthesis (GO:0008295)	36

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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