Sol Genomics Network

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Unigene SGN-U196067

Unigene Basic Information

Unigene ID:	SGN-U196067
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196067
mRNA sequence:	Length: 1393 bp

>SGN-U196067 Capsicum annuum #1 (38 members)
CCCCGGGCTGCAGAATTCGCCCTCATTCTCATAGTGTTCATCGAGATCTCTTTGTAAATCTCTCTGTAGATCTTGTTCAACAAACAAATG
GCTAAAGATCCAGTTCGCGTTCTCGTTACTGGTGCTGCTGGACAAATTGGATATGCCTTGGTGCCAATGATTGCCAGGGGAGTGATGTTG
GGTGCAGATCAGCCTGTCATCCTCCACATGTTGGATATTCCACCTGCTGCTGAGGCACTGAACGGAGTGAAGATGGAATTAGTGGATGCT
GCCTTCCCTCTTCTTAAGGGTGTTGTTGCCACAACTGATGCTGTTGAGGCATGCACTGGTGTCAACATTGCTGTCATGGTTGGAGGTTTC
CCCAGGAAAGAAGGCATGGAAAGAAAAGATGTCATGTCAAAGAATGTTTCTATTTACAAGTCCCAGGCTTCTGCTCTTGAGAAGCATGCA
GCTCCCAACTGCAAGGTGTTGGTTGTTGCTAACCCTGCCAATACAAATGCATTGATCTTGAAAGAATTTGCACCTTCCATCCCTGAGAAG
AACATTACCTGTCTCACAAGGTTGGACCATAACAGGGCCCTTGGCCAAGTCTCAGAGAGACTGAGTGTCCAAGTGAGTGATGTTAAAAAT
GTCATCATTTGGGGAAACCACTCATCAACACAATATCCTGATGTCAACCACGCAACAGTTACAACACCAACTGGAGAAAAGCCAGTCCGT
GAACTTGTGGCTGATGATGCATGGTTGAACGGTGAGTTCATTACTACTGTACAGCAGAGGGGTGCTGCCATTATCAAGGCTAGAAAGCTT
TCTAGCGCTCTTTCTGCTGCTAGTTCTGCTTGTGATCACATTCGCGATTGGGTCCTTGGAACTCCAGAGGGTACTTTTGTTTCTATGGGT
GTTTACTCTGATGGGTCATACAATGTCCCAGCTGGGCTCATTTATTCCTTCCCAGTTACATGCAAAAATGGAGAATGGTCCATTGTTCAA
GGTCTTCCAATTGACGAGTTCTCAAGAAAGAAGTTGGACTTGACAGCTGAGGAGCTATCGGAGGAAAAAGCATTGGCTTACTCCTGCCTT
ACATAAATTTTGCCTTTTCAACCTATGGGGAGTGTATGTGGTAATAGAAGTGGCTTCAGGTTTTGAATAAGGCCATTGTTGATTCTTGAG
GAAAGTAATGATGGGGATACTGCTTTGTCAGTTGTTTACTCTTTAATGTTCGAGATTGAACTGAATCTGTCTTTTTTGCGAATAAGTAAG
TAGCATCTTTTGTTGTTCCTTTGCTGATAATTTTCCTATCGTGAGCGAGTTTTAGCTTTATCTTCACCTTTCTTTGTCTAGTCTTTAATT
GTCTTAAAATGCATATCCTCTGTGCTCTAAAAAAAAATAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	3
Capsicum annuum	KS07	Flower bud	4235	6
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	4
Capsicum annuum	KS10	Hairy root	2179	12
Capsicum annuum	KS11	Early root	2168	6
Capsicum annuum	KS12	Placenta	4279	7

mRNA member sequences (38)

Alignment image suppressed for unigene with 38 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	122	ldh	108
2	22122	Ferredoxin Mal_dehydrog Mdh_AS ldh	60
5	56432	2Fe2S_fd_BS Ferredoxin	43
1.1	101478	Lactate/malate dehydrogenase - Biological Process: tricarboxylic acid cycle intermediate metabolism (GO:0006100) - Molecular Function: oxidoreductase activity (GO:0016491)	110
2	118552	2Fe-2S Ferredoxin-like fold - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) Ferredoxin - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) Ferredoxin [2Fe-2S] plant - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118)	56
5	129094	2Fe-2S Ferredoxin-like fold - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) 2Fe-2S ferredoxin iron-sulfur binding site - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) Ferredoxin - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) Ferredoxin [2Fe-2S] plant - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118)	42

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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