Sol Genomics Network

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Unigene SGN-U196111

Unigene Basic Information

Unigene ID:	SGN-U196111
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196111
mRNA sequence:	Length: 1860 bp

>SGN-U196111 Capsicum annuum #1 (29 members)
CTCTTCTTGTTGCAATGGTTTAAGGATACTGAGTATATTTCGCTTGCTTTGATCGCAAGAAGCTNCTTTTGAACACTGTAATTGTGCTTG
AACAAGAGGAGGAGCTTGACCTGGTGATTGATATCAGCCGTAAGATGGCTGTCCGGCCCGTAATTGGACTTCGTGCTAAGCTGAGGACCA
AGCATTCGGGCCATTTTGGATCCACTTCTGGAGAAAAGGGCAAATTTGGGTTGACAACAACTCAGATTCTTCGTGTAGTGAAGAAGTTGG
AGGGGTCTGGAATGCTTGATTGTCTTCAGTTATTGCATTTTCACATTGGATCTCAGATCCCAACAACGGAGTTGCTTGCTGATGGTGTTG
GTGAGGCCACTCAGATTTACTCTGAGTTAGTCCGTCTTGGAGCTGGTATGAAATTCATTGATATTGGAGGTGGCCTTGGAATTGACTATG
ACGGTTCGAAATCATCCGATTCGGATGTCTCTGTTGCCTATGGCATTGAGGAATATGCCTCTGCTGTTGTCCAGGCTGTCCAATTTGTCT
GTGACCGTAAGGGCGTTAAGCATCCAGTGATTTGCAGCGAAAGTGGCAGGGCAATTGTTTCTCACCATTCAATTATGATTTTTGAAGCTG
TGTCTGCTTCTACTACTAATGTTTCTCCACAGCTGTCTTCCGGTGGTCTTCAATCACTGGCGGAAACTCTCAATGAAGATGCCCGTGCTG
ATTACCGAAACCTATCTGCTGCTGCTGTCCGTGGCGAATATGATACATGTCTCCTTTACTCTGATCAGTTGAAACAGAGATGTGTGGAAC
AGTTCAAAGATGGTTCCTTGGATATTGAACAGCTTGCTGCAGTGGATAGCATCTGTGACTTGGTGTCGAAAGCTATCGGGGTTTCTGATC
CTGTTCGCGCTTACCATGTGAATCTGTCAGTTTTCACCTCAATTCCTGATTTTTGGGCATTTGGCCAATTGTTTCCGATCGTTCCAATTC
ATCGTTTGGATGAAAAGCCTACAATGAGAGGAATACTGTCGGACCTGACCTGTGACAGTGATGGGAAGGTAGACAAGTTCATTGGGGGCG
AATCAAGCTTGCCACTCCATGATTTGGGAAGCAATGGTGGTGATGGTGGGCGGTATTATCTGGGGATGTTTTTGGGTGGGGCTTATGAGG
AGGCGCTCGGAGGGCTCCACAACCTGTTTGGTGGACCAAGCGTCGTGCGTGTGTTGCAGAGCGATAGCCCTCACAGCTTCGCTGTGACTC
GCTCTGTCCCTGGCCCGTCCTGTGCTGACGTGCTCCGGGCGATGCAGTTCGAGCCTGAACTCATGTTCGAGACTCTCAAGCACCGTGCAG
AGGAATCCTTTGATCAAGAAGAAGAAATAGAAGATAAAGGCCTGGCCTTTGAATCTTTAATCAGCGGCTTAGCTCAGTCCTTCCACAACA
TGCCTTACCTTGTGGCACCTTCGTCTTGCTGCTTCACCGCAGCAACCGCGAAAGGTGGGAGCTATTACTACTACAATGAAGACAATGCTG
CTGATTGTGCAACAGCGGAGGATGAGATTTGGTCCTATTGCACTGCTTGAACTGTCTCGTAACATCTCCAGTTTGTCTTAGTTTGTCGTC
GAGGTCGTCAGTTTTTTTTTTTTGAATAAATTCCCCTTAGTTGGTGGTGTTACATTTCTTTGTTTTTAGTTTCTTGTTTTTAAATGATGC
AGTAGAAAGACTGTACATGTCATCTCTATTGCATTTAGCTTGTGTTATTGTTGTTTTAAGAGGAAGAGTTGTGGGTACATAGACCAAATC
AATTTGATGTATGATTTGGCCTCTTCCTATGTATTCTCCTCCTATTATGTAATGCATTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY156514	arginine decarboxylase	arginine decarboxylase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	5
Capsicum annuum	KS07	Flower bud	4235	9
Capsicum annuum	KS08	Anther	2304	1
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	4
Capsicum annuum	KS10	Hairy root	2179	4
Capsicum annuum	KS11	Early root	2168	4
Capsicum annuum	KS12	Placenta	4279	2

mRNA member sequences (29)

Alignment image suppressed for unigene with 29 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	514	Decarbxylse2 DAP_decrbxlase	34
2	23220	Decarbxylse2 Arg_decrbxlase DAP_decrbxlase	14
5	57279	Decarbxylse2 Arg_decrbxlase DAP_decrbxlase	14
1.1	101407	Orn/DAP/Arg decarboxylase 2 - Molecular Function: catalytic activity (GO:0003824)	255
2	119696	Orn/DAP/Arg decarboxylase 2 - Molecular Function: catalytic activity (GO:0003824) Arginine decarboxylase - Biological Process: arginine catabolism (GO:0006527) - Biological Process: spermidine biosynthesis (GO:0008295) - Molecular Function: arginine decarboxylase activity (GO:0008792)	13
5	130022	Orn/DAP/Arg decarboxylase 2 - Molecular Function: catalytic activity (GO:0003824) Arginine decarboxylase - Biological Process: arginine catabolism (GO:0006527) - Biological Process: spermidine biosynthesis (GO:0008295) - Molecular Function: arginine decarboxylase activity (GO:0008792)	13

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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