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Unigene SGN-U198283

Unigene Basic Information

Unigene ID:	SGN-U198283
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	198283
mRNA sequence:	Length: 411 bp

>SGN-U198283 Capsicum annuum #1 (2 members)
GGGAACTTTGCGAAAGGTGTTTCCCATTTTGGATATGCACCAGGAACAGCAAAAGGGGTTGCACCGCGAGCTAGGCTAGCTGTATACAAG
TTTAGCTTTAACGAAGGAACCTTCACTTCAGATTTAATTGCTGCTATGGACCAAGCTGTTGCGGATGGTGTTGATATGATATCCATTTCT
TATGGGGACCGTTTCATTCCCTTGTATGAAGACTCCATATCCATTGCTTCTTTTGGAGCCATGATGAAGGGAGTGCTGGTTTCAGCTTCA
GCTGGAAATCGAGGTCCAGGGATTGGAAGTTTAAACAATGGATCTCCATGGATCTTGTGTGTGGCATCAGGACACACTGATCGGACATTT
GCAGGAACTTTGACTTTGGGCAATGGCTTAAAAATTAGGGGGTGGAGCTTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	1
Capsicum annuum	KS10	Hairy root	2179	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|7435654\|pir\|\|T07169	271.9	1.2e-72	97.81	411 bp (100.0%)	1
Description:	gi\|7435654\|pir\|\|T07169 subtilisin-like proteinase (EC 3.4.21.-) 3 - tomato gi\|3687301\|emb\|CAA06…
arabidopsis	blastx	At3g14240.1	136.3	4.5e-33	49.64	411 bp (100.0%)	1
Description:	At3g14240.1 68410.m01616 subtilisin-like serine protease contains similarity to SBT1 GI:1771160…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P33288 (129 Aa)

GNFAKGVSHFGYAPGTAKGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISISYGDRFIPLYEDSISIASFGAMMKGVLVSAS
AGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLLWAMA

SignalP predicts non-secretion with a score of 0.076

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P152262 (137 Aa)

GNFAKGVSHFGYAPGTAKGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISISYGDRFIPLYEDSISIASFGAMMKGVLVSAS
AGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL

SignalP predicts non-secretion with a score of 0.076

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	48	Pept_S8_S53	236
2	21991	Pept_S8_S53	226
5	56263	Pept_S8_S53	218
1.1	101418	Peptidase S8 and S53 subtilisin kexin sedolisin - Molecular Function: subtilase activity (GO:0004289) - Biological Process: proteolysis (GO:0006508)	221
2	118426	Proteinase inhibitor I9 subtilisin propeptide - Molecular Function: subtilase activity (GO:0004289) - Molecular Function: identical protein binding (GO:0042802) - Biological Process: negative regulation of enzyme activity (GO:0043086) Peptidase S8 and S53 subtilisin kexin sedolisin - Molecular Function: subtilase activity (GO:0004289) - Biological Process: proteolysis (GO:0006508)	214
5	128934	Peptidase S8 and S53 subtilisin kexin sedolisin - Molecular Function: subtilase activity (GO:0004289) - Biological Process: proteolysis (GO:0006508)	205

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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