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Unigene SGN-U198880

Unigene Basic Information

Unigene ID:	SGN-U198880
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	198880
mRNA sequence:	Length: 420 bp

>SGN-U198880 Capsicum annuum #1 (2 members)
CAACAATTCAACTCTACTCTCCTCTCCCCCCACCTACAAAAGCCCTCGGGTTTTCAGTTTTCTTCTCAAAGAAGACACTTAGCTTCACTT
TTCTCTCTCTTCGCGTTTTCCAATTCTTCGTTCCGTTCGATGGCTTTTCAGAGCAAAAAACTCATCAACGATCCTAATGATGTTGTGACA
GAGTTCATCGAGGGACTTATCGAGACCTATCCAGGATTGCAATATCTGGATGGATTCCCTGAGGTTAAGGTTGTCTTGCGTGCTGATATT
TCTGGTGCAAAATATGACAAAGTTGCCATCATATCAGGTGGTGGAAGTGGCCATGAACCTGCTTATGCTGGATTTGTTGGAGAAGGGATG
CTGACTGCAGCTATCTGTGGGGACGTTTCTACCTCTCCAAATGTTGACTCAATTCTTGCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	1
Capsicum annuum	KS12	Placenta	4279	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|7387627\|sp\|O04059\|DHBK_LYCES	184.9	1.9e-46	93.81	291 bp (69.3%)	1
Description:	gi\|7387627\|sp\|O04059\|DHBK_LYCES PUTATIVE 3,4-DIHYDROXY-2-BUTANONE KINASE gi\|7489046\|pir\|\|T06369…
arabidopsis	blastx	At3g17770.1	172.6	6.1e-44	85.57	291 bp (69.3%)	1
Description:	At3g17770.1 68410.m02043 dihydroxyacetone kinase -related similar to dihydroxyacetone kinase GB…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P33887 (97 Aa)

MAFQSKKLINDPNDVVTEFIEGLIETYPGLQYLDGFPEVKVVLRADISGAKYDKVAIISGGGSGHEPAYAGFVGEGMLTAAICGDVSTSP
NVDSILA

SignalP predicts non-secretion with a score of 0.036

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P152866 (140 Aa)

QQFNSTLLSPHLQKPSGFQFSSQRRHLASLFSLFAFSNSSFRSMAFQSKKLINDPNDVVTEFIEGLIETYPGLQYLDGFPEVKVVLRADI
SGAKYDKVAIISGGGSGHEPAYAGFVGEGMLTAAICGDVSTSPNVDSILA

SignalP predicts non-secretion with a score of 0.163

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2546	Dak2 Dak1	7
2	25021	Dak2 Dak1	7
5	59037	Dak2 Dak1	7
1.1	102892	Dak phosphatase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071) Dihydroxyacetone kinase Dak kinase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071)	9
2	120971	Dak phosphatase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071) Dak kinase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071) Dihydroxyacetone kinase	7
5	131699	Dak phosphatase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071) Dak kinase - Molecular Function: glycerone kinase activity (GO:0004371) - Biological Process: glycerol metabolism (GO:0006071) Dihydroxyacetone kinase	6

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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