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Unigene SGN-U199468

Unigene Basic Information

Unigene ID:	SGN-U199468
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	199468
mRNA sequence:	Length: 297 bp

>SGN-U199468 Capsicum annuum #1 (1 members)
TTATTGTTGTTCAAGAAATGGGGAAGTACATAAGGAAGACAAGAAAGGAGGAGAAGTATACCACTTGGTGTGCTTACAAGGGCAAAAGCT
TTAGCTCTTAAACGTGCACCGTCTGCGGCGGCGGCGGTGGTGAAGGAGGAGGATTCAGGTGGGTCCTACCTAGAGCTGAGGAGTGAGAGG
TTGGATAAACCCTTTATGGNTCTTGAAGGAAGAAAGCAGAGAAATGGGGTTTCCAAGAATGCTAACCCTAAGGACTGTTTGGCTAAGGAA
ATGGAAAAGATGAAGGGAGATGGGAAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E492197
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P153477 (88 Aa)

GRQERRRSIPLGVLTRAKALALKRAPSAAAAVVKEEDSGGSYLELRSERLDKPFMXLEGRKQRNGVSKNANPKDCLAKEMEKMKGDGN

SignalP predicts non-secretion with a score of 0.192

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P34028 (98 Aa)

IVVQEMGKYIRKTRKEEKYPLGVLTRAKALALKRAPSAAAAVVKEEDSGGSYLELRSERLDKPFMXLEGRKQRNGVSKNANPKDCLAKEM
EKMKGDGN

SignalP predicts non-secretion with a score of 0.049

No InterPro domain matches or not analyzed.

Gene Family (5)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	698	CDI	27
2	23507	CDI	12
5	74758		1
1.1	102069	Cyclin-dependent kinase inhibitor - Molecular Function: cyclin-dependent protein kinase inhibitor activity (GO:0004861) - Cellular Component: nucleus (GO:0005634) - Biological Process: cell cycle arrest (GO:0007050)	23
2	119705	Cyclin-dependent kinase inhibitor - Molecular Function: cyclin-dependent protein kinase inhibitor activity (GO:0004861) - Cellular Component: nucleus (GO:0005634) - Biological Process: cell cycle arrest (GO:0007050)	13

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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