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Unigene SGN-U204166

Unigene Basic Information

Unigene ID:	SGN-U204166
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	204166
mRNA sequence:	Length: 432 bp

>SGN-U204166 Capsicum annuum #1 (1 members)
CCTATGACAATGAAACTGGGATCGTTCAAAGACGTCTTTCAAATGGTATTCCTATACATTATAAGATTACAAAAAATGAAGCCAATTGTG
GGGTGATGAGACTTATCGTCGGAGGTGGACGGGCAGCTGAAAGTTCTGATGAAAAAGGATCCGTGATTGTGGATGTTTGAACTTTGAGTA
AAGGGGGACGTGTTGGGAACTTTTCAAGAGAACAGGTAGAGCTTTTCTGTGTGAATCATCTCATAAATTGCTCACTGGAGTCGACAGAAG
AATTTATCTGCATGGAGTTCCGGTTTACTTTGCGAGACAATGCAATGCGTGCTGCCTTCCAGTTACTTCATATGGTGCTTGAGCATAGTG
TTTGGTCGGATGATGCATTTGACCGAGCTAAACAGCTGTACATGTCATATTATCGCTCTATCCCTAAAAGTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS10	Hairy root	2179	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E505530
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|7488819\|pir\|\|T06521	233.8	3.6e-61	79.72	429 bp (99.3%)	3
Description:	gi\|7488819\|pir\|\|T06521 pitrilysin (EC 3.4.24.55) - garden pea gi\|799369\|gb\|AAA81472.1\| metalloe…
arabidopsis	blastx	At5g42390.1	228.8	7.5e-61	78.32	429 bp (99.3%)	3
Description:	At5g42390.1 68412.m04655 pitrilysin
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P158287 (87 Aa)

TLSKGGRVGNFSREQVELFCVNHLINCSLESTEEFICMEFRFTLRDNAMRAAFQLLHMVLEHSVWSDDAFDRAKQLYMSYYRSIPKS

SignalP predicts non-secretion with a score of 0.05

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P38577 (144 Aa)

YDNETGIVQRRLSNGIPIHYKITKNEANCGVMRLIVGGGRAAESSDEKGSVIVDXLNFEKGGRVGNFSREQVELFCVNHLINCSLESTEE
FICMEFRFTLRDNAMRAAFQLLHMVLEHSVWSDDAFDRAKQLYMSYYRSIPKSX

SignalP predicts non-secretion with a score of 0.037

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1466	Peptidase_M16 Peptidase_M16_C	13
2	25676	Peptidase_M16 Prok_nadp_idh LRR Peptidase_M16_C Ribosomal_L20	6
5	59667	Peptidase_M16 Prok_nadp_idh LRR Peptidase_M16_C Ribosomal_L20	6
1.1	101620	Peptidase M16 C-terminal	57
2	120841	Peptidase M16 N-terminal Peptidase M16 C-terminal	8
5	132102	Peptidase M16 N-terminal Peptidase M16 C-terminal	6

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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