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Unigene SGN-U206480

Unigene Basic Information

Unigene ID:	SGN-U206480
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206480
mRNA sequence:	Length: 358 bp

>SGN-U206480 Solanum melongena #2 (1 members)
AGAAATCCCAAAAGCAAAACTCAGTCTGAGAGCATGTCTGGAATGGAAAGATTGCAGCGGATGTTCGCCGGAGCTGGCGGCGCGTTAGGC
CACCCGCCACCGGACTCTCCAACTCTGGACTCTTCTGAGCAAGTTTACATCTCTTCTCTTGCCCTCCTCAAGATGCTTAAACACGGGAGG
GCTGGAGTTCCTATGGAAGTTATGGGATTGATGTTGGGGGAATTCGTCGATGAGTATACAGTGCGTGTAGTGGATGTCTTTGCAATGCCT
CAGAGTGGTACTGGAGTGAGTGTTGAAGCTGTTGATCATGTTTTCCAGACCAATATGCTTGACATGCTCAAGCAGACTGGGAGACCTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E517160
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|21592398\|gb\|AAM64349.1\|	184.5	2.8e-46	92.38	315 bp (88.0%)	1
Description:	26S proteasome non-ATPase regulatory subunit [Arabidopsis thaliana]
arabidopsis	blastx	At5g23540.1	184.5	7.3e-48	92.38	315 bp (88.0%)	1
Description:	At5g23540.1 68412.m02532 26S proteasome regulatory subunit (RPN11), putative similar to 26S pro…
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P208901 (119 Aa)

RNPKSKTQSESMSGMERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMP
QSGTGVSVEAVDHVFQTNMLDMLKQTGRP

SignalP predicts non-secretion with a score of 0.089

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30056 (120 Aa)

RNPKSKTQSESMSGMERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMP
QSGTGVSVEAVDHVFQTNMLDMLKQTGRPX

SignalP predicts non-secretion with a score of 0.089

IPR003639 Mov34-1
IPR000555 Mov34/MPN/PAD-1

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	183	Pept_M67_Mov34	78
2	23803	Peptidase_M67 Pept_M67_Mov34	10
5	57883	Peptidase_M67 Pept_M67_Mov34	10
1.1	101504	Mov34/MPN/PAD-1	97
2	120251	Mov34/MPN/PAD-1 Flagellar motor switch protein FliG-like Mov34-1	10
5	130785	Mov34/MPN/PAD-1 Flagellar motor switch protein FliG-like Mov34-1	9

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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