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Unigene SGN-U206495

Unigene Basic Information

Unigene ID:	SGN-U206495
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206495
mRNA sequence:	Length: 427 bp

>SGN-U206495 Solanum melongena #2 (1 members)
TTTTTTTTTTTTTTTTTTTCTTCAAATTGTGTGCTTTTACTTGGGCAAAAATCTCGAACAAAAAACTCTCAAGCCTCAAGTCTCCGGGTA
ATGAGGTACCCAACTACCCATCATCAGTTTCAAAAAGAGTTGAGAAAAAGAATGTACGATGTCAGAATGACAAGACGTTGGTTGAAACAA
CCACCCAAAATTATTTTTACAGTCGAGAACTACCAGATAATTTGTAACAGAAACAAGTTCACTAAGTTGTTCCATAGCCCATTGTCTATG
GGTGGGGTGATTGTCCTAAACCTCTGGCAACGCCTACGGCTTAAGAGCCAAGGCTAGTCCAAATTTGGCACTTTTGTCAACAGATTTTGT
GTCCACTTCACCTGAAATGGTGAAAAGTGACTTTGGACGCCACTCATGCTGAATCAGAGCAGTTGCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E517774
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P208916 (108 Aa)

FFFFFFSSNCVLLLGQKSRTKNSQASSLRVMRYPTTHHQFQKELRKRMYDVRMTRRWLKQPPKIIFTVENYQIICNRNKFTKLFHSPLSM
GGVIVLNLWQRLRLKSQG

SignalP predicts non-secretion with a score of 0.385

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30070 (116 Aa)

ATALIQHEWRPKSLFTISGEVDTKSVDKSAKFGLALALXAVGVARGLGQSPHHRQWAMEQLSELVSVTNYLVVLDCKNNFGWLFQPTSCH
SDIVHSFSQLFLKLMMGSWVPHYPET

SignalP predicts non-secretion with a score of 0.122

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	308	Porin_Euk	51
2	22197	Porin_Euk	46
5	56655	Porin_Euk	27
1.1	101673	Porin eukaryotic type - Cellular Component: mitochondrial outer membrane (GO:0005741) - Biological Process: anion transport (GO:0006820) - Molecular Function: voltage-gated ion-selective channel activity (GO:0008308)	48
2	118656	Porin eukaryotic type - Cellular Component: mitochondrial outer membrane (GO:0005741) - Biological Process: anion transport (GO:0006820) - Molecular Function: voltage-gated ion-selective channel activity (GO:0008308)	39
5	129295	Porin eukaryotic type - Cellular Component: mitochondrial outer membrane (GO:0005741) - Biological Process: anion transport (GO:0006820) - Molecular Function: voltage-gated ion-selective channel activity (GO:0008308)	27

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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