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Unigene SGN-U206614

Unigene Basic Information

Unigene ID:	SGN-U206614
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206614
mRNA sequence:	Length: 249 bp

>SGN-U206614 Solanum melongena #2 (1 members)
CAAAAAACAAAAATAAAATGGGCTCATTGATAGGTCATGTAGTACCAGGACTTGGTTTCTTTCTTATAGGTATTTGGCATTTGCTCAACC
ACATCAGATTACATGCTTTGCACCCAAAATCTTACACTTCCTTGCCATGGGTCCCAGCTCCAAAAATCAGGTATGCAGAGCTTTATGTTA
TTATGTTTGGCACCTTACTCTCCATATCAATGGAGCTCTTCATTGGTCCATCAAAACACCAACCCTTTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E518843
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|15222675\|ref\|NP_175919.1\|	106.7	8.5e-23	57.14	231 bp (92.8%)	3
Description:	unknown protein [Arabidopsis thaliana] >gi12323182\|gb\|AAG51578.1\|AC027034_24 unknown protein; 7…
arabidopsis	blastx	At1g55230.1	106.7	2.1e-24	57.14	231 bp (92.8%)	3
Description:	At1g55230.1 68408.m05783 hypothetical protein
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P209045 (82 Aa)

KNKNKMGSLIGHVVPGLGFFLIGIWHLLNHIRLHALHPKSYTSLPWVPAPKIRYAELYVIMFGTLLSISMELFIGPSKHQPF

SignalP predicts non-secretion with a score of 0.42

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30182 (78 Aa)

MGSLIGHVVPGLGFFLIGIWHLLNHIRLHALHPKSYTSLPWVPAPKIRYAELYVIMFGTLLSISMELFIGPSKHQPFX

SignalP predicts secretion with a score of 0.536

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	277	DUF716	57
2	24194	DUF716	9
5	58568	DUF716	8
1.1	101370	Jacalin-related lectin	591
2	120615	Protein of unknown function DUF716	8
5	131727	Protein of unknown function DUF716	6

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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