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| Unigene Basic Information |
| Unigene ID: | SGN-U207408 |
| Unigene Build: | Solanum melongena #2 |
| Date: | 2004-01-12 |
| Organism: | S.melongena |
| Alternative ID: | 207408 |
| mRNA sequence: | Length: 158 bp |
>SGN-U207408 Solanum melongena #2 (1 members)
GCTGTTTTAGGTGCAGCAAAAGCTCTTGCTGAATTAAGGCCTTTTGGAGTAGAGGTGCATTTCATTGTTGCAGCTTGCGAAAATATGATC
AGTGGAGAAGGCATGAGGCCTGGAGACATTGTCACAGCTTTCAAATGGGAAGACCATTGAGGTTAACA
[Blast] [AA Translation]
| Associated Loci (0) | None |
| Genomic locations (0) | None |
Library representation (1)
Library representation (1)
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| Organism | Library | Description | Library size (#ESTs) | Ests in this Unigene |
|---|---|---|---|---|
| Solanum melongena | cSML | buds & flowers anthesis-stage flowers, 4-8 week old plants | 4031 | 1 |
mRNA member sequences (1)
mRNA member sequences (1)
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[Show Image]
Markers Information (0)
Markers Information (0)
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Unigene Mapped Marker Information
No member sequence or clone is mapped.
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COSII Markers Information
None cosii markers associated to this unigene.
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Expression Data (0)
Expression Data (0)
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No expression data was found associated to this unigene
Annotations (manual: 0 | blast: 2 | go: 0 )
Annotations (manual: 0 | blast: 2 | go: 0 )
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Manual annotations
None manual annotation was found for this unigene
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Blast Annotations [Show All]
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GO Terms Annotations
No Gene Ontology annotation
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Protein prediction analysis (2)
Protein prediction analysis (2)
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Prediction based on longest six frame method
>SGN-P209881 (51 Aa)
>SGN-P209881 (51 Aa)
PQWSSHLKAVTMSPGLMPSPLIIFSQAATMKCTSTPKGLNSARAFAAPKTA
SignalP predicts non-secretion with a score of 0.294
No InterPro domain matches or not analyzed.
Prediction based on ESTScan [ Show ESTScan Detail]
>SGN-P30919 (49 Aa)
AVLGAAKALAELRPFGVEVHFIVAACENMISGEGMRPGDIVTAFKWEDH
SignalP predicts non-secretion with a score of 0.171
No InterPro domain matches or not analyzed.
Gene Family (6)
Gene Family (6)
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| Family Build (I value*) | Family ID | Annotation** | # Members |
|---|---|---|---|
| 1.2 | 401 | Peptidase_M17_C Ribosomal_L16 Ribosomal_L10E Peptidase_M17_N | 43 |
| 2 | 22233 | Peptidase_M17_C Ribosomal_L16 Ribosomal_L10E Peptidase_M17_N | 42 |
| 5 | 56445 | Peptidase_M17_C Ribosomal_L16 Ribosomal_L10E Peptidase_M17_N | 42 |
| 1.1 | 101635 | Ribosomal protein L10E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) Peptidase M17 leucyl aminopeptidase C-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) Lg106-like Peptidase M17 leucyl aminopeptidase N-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) | 54 |
| 2 | 118642 | Peptidase M17 leucyl aminopeptidase C-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) Peptidase M17 leucyl aminopeptidase N-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) Ribosomal protein L10E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) | 40 |
| 5 | 129107 | Peptidase M17 leucyl aminopeptidase C-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) Peptidase M17 leucyl aminopeptidase N-terminal - Molecular Function: aminopeptidase activity (GO:0004177) - Cellular Component: intracellular (GO:0005622) - Biological Process: proteolysis (GO:0006508) Ribosomal protein L10E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412) | 40 |
*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.
| Preceding Unigenes (0) | None |
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Library representation (1)
Library representation (1)
