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Unigene SGN-U207944

Unigene Basic Information

Unigene ID:	SGN-U207944
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	207944
mRNA sequence:	Length: 394 bp

>SGN-U207944 Petunia hybrida #1 (4 members)
TGCAGTTGCTGTAACTTGTTCATGGCTTATCTTCCGAAACCCAATCTCAATGATGAATGCCGTTGGATGTGCAATAACGCTTGTTGGATG
TACGTTCTATGGGTATGTGAGACACATGCTCTCACAACAAGCACCAGGCACTCCCCGTACACCCAGGACCCCTAGGAAAAGTATGGAGTT
TGTCCCTCTAGTTAACGAGAAGTTAGAGGATAAAGTTTAATGGCAGGTGCGCTTGAAAACTTGATCCAGGTACAAGTTTCGTATAGAAGA
GAAATATAAAGCATAAACAAAATCTTTCATTGTTGTCTAATTTACCTTTTAGGTAAACTGAATTATGAATCTCTTATTTAACTTATTTAT
TTACCTTCATCAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-DevA	all floral organs several	2870	4

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|15219121\|ref\|NP_173605.1\|	105.5	1.7e-22	81.94	216 bp (54.8%)	2
Description:	glucose-6-phosphate/phosphate translocator-related [Arabidopsis thaliana] >gi6552731\|gb\|AAF1653…
arabidopsis	blastx	At1g21870.1	105.5	7.7e-24	81.94	216 bp (54.8%)	2
Description:	At1g21870.1 68408.m02474 glucose-6-phosphate/phosphate translocator-related similar to glucose …
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P203241 (72 Aa)

AVAVTCSWLIFRNPISMMNAVGCAITLVGCTFYGYVRHMLSQQAPGTPRTPRTPRKSMEFVPLVNEKLEDKV

SignalP predicts non-secretion with a score of 0.42

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P40908 (92 Aa)

AVAVTCSWLIFRNPISMMNAVGCAITLVGCTFYGYVRHMLSQQAPGTPRTPRTPRKSMEFVPLVNEKLEDKXLMAGALENLIQVQVSYRR
EI

SignalP predicts non-secretion with a score of 0.42

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	85	DUF6	149
2	22174	CO/AA/NH_transpt DUF6 Tpt_PEP_transl	50
5	57924	CO/AA/NH_transpt UDPgal_transpt DUF6 Tpt_PEP_transl	10
1.1	101458	Protein of unknown function DUF250	134
2	118631	Protein of unknown function DUF250	41
5	130848	Protein of unknown function DUF250 Protein of unknown function DUF6 transmembrane - Cellular Component: membrane (GO:0016020)	8

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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