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Unigene SGN-U210316

Unigene Basic Information

Unigene ID:	SGN-U210316
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	210316
mRNA sequence:	Length: 262 bp

>SGN-U210316 Petunia hybrida #1 (1 members)
GATCAACTGCGTCCATTCAGTCTCCTCTACACGTTTCGAAAGGCAGTAGAAGCAGGTAAGCTTTTGGACCCAGTCAAGGTGGTAGCACAG
GTCTTGATGTATCTATTTTTCATTGGGGGGGTGGCAACTCATTCTTAGATAAAGCTAGCAAATTCCTATTTTTATGACAAGGGCATGAAC
ATACTTGCCTGGAAATTATTTTTACCTGAGGGAGAGTATGAGTTGGATCACNCTGGTGTTGACCTACTGGNGCGGGGGAGAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	cPHA	stamens stamens from open flowers on 18-20 week old plants	6801	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E530520
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|18417344\|ref\|NP_568298.1\|	106.3	1.2e-22	67.95	234 bp (89.3%)	1
Description:	AtCXE16 (Arabidopsis thaliana carboxyesterase 16); hydrolase >gi21553610\|gb\|AAM62703.1\| esteras…
arabidopsis	blastx	At5g14310.1	106.3	2.8e-24	67.95	234 bp (89.3%)	1
Description:	At5g14310.1 68412.m01544 expressed protein low similarity to PrMC3 [Pinus radiata] GI:5487873
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P42982 (88 Aa)

DQLRPFSLLYTFRKAVEAGKLLDPVKVVAQVLMYLFFIGGGGNSFLIKLANSYFYDKGMNILAWKLFLPEGEYELDHXGVDLLXRGRX

SignalP predicts non-secretion with a score of 0.222

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P205665 (50 Aa)

LSPAPVGQHQXDPTHTLPQVKIISRQVCSCPCHKNRNLLALSKNELPPPQ

SignalP predicts non-secretion with a score of 0.041

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	96	Ser_estrs	130
2	24675	Ser_estrs	8
5	57949	Ser_estrs	10
1.1	101471	Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824) Alpha/beta hydrolase fold-3	113
2	121172	Alpha/beta hydrolase fold-3 Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	7
5	131416	Alpha/beta hydrolase fold-3 Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	7

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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