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Unigene SGN-U211345

Unigene Basic Information

Unigene ID:	SGN-U211345
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	211345
mRNA sequence:	Length: 406 bp

>SGN-U211345 Petunia hybrida #1 (1 members)
CTTCTCCTTCTCCTCTGTACTCGAGGCATTCACCCCTTGCTGATTTGGACCGCTATGCTTCTGCTGCACATGCAGAGACCAGTAGCAGTA
GTAGCGATGGTGCAGAAAAAGCTGGGGATGGTCACGGTTTTTGGACTGGATTACCTGATCGGAATGGTCATGCTAGGGTTCCAGAAAGCA
ACGGAAGGACACCTTCTCTCTGTCCCAACTCAAGTAAGCATTGTAGAAATCTAGTTAGTAGTCATAGTAGTAGTAAGGCCGACTCAAGTA
GATTAGGTCGGGTTAACCCTTCTGACAACTCGAAATCTCCTGTAACTTGTAGAGATCGATGATGGAAAGTGCATTTCGGACATGGTATTA
TAAAGTTTTTGTATTCTAGAGGGAGGAAATAAAGAGTTGGGGGAGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-C2H4	all floral organs anthesis	3072	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E524374
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P206715 (109 Aa)

SPSPLYSRHSPLADLDRYASAAHAETSSSSSDGAEKAGDGHGFWTGLPDRNGHARVPESNGRTPSLCPNSSKHCRNLVSSHSSSKADSSR
LGRVNPSDNSKSPVTCRDR

SignalP predicts non-secretion with a score of 0.072

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P43962 (119 Aa)

SPSPLYSRHSPLADLDRYASAAHAETSSSSSDGAEKAGDGHGFWTGLPDRNGHARVPESNGRTPSLCPNSSKHCRNLVSSHSSSKADSSR
LGRVNPSDNSKSPELVEIDDGKCISDMVL

SignalP predicts non-secretion with a score of 0.072

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	45	MATH	248
2	28221		3
5	64527		2
1.1	101414	TRAF-like	237
2	119162	Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 - Molecular Function: cysteine-type endopeptidase activity (GO:0004197) - Molecular Function: ubiquitin thiolesterase activity (GO:0004221) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511)	19
5	137855		2

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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