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Unigene SGN-U211763

Unigene Basic Information

Unigene ID:	SGN-U211763
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	211763
mRNA sequence:	Length: 432 bp

>SGN-U211763 Petunia hybrida #1 (1 members)
CCATTGTCTCCTCCTCCGCCTCCTTCACCGATTAACACGGCCTCGGACAAAGAAAAAGAAAAATATAACCACCAGCACCATCATCAGCAA
AACCACCATAAGTCTAATGTGAAATTAAGCCCACCACAGAAGCTAAATTGGGGGAAAAGACTCGGGTTAATGTTCGTGGGCGTTGCCGCG
ATCTTGCAAGTCTGTGTGGTGGCATTCTTAATTATCAAAAGAAAGCAACTTTTGAAGGCTGATGCTAGATTTTGAAATGACACACATTTG
TTGATTTGAATCTGATGTTTTATTTATATTTAGCTAGAGTTATACGGATTGAGATTCTTTTTTAAAAAAGCGGCTTTGGCAATGAATTTG
GCAACACCATGGAATGGATTACAAAGATTAAGGATTCAGCTGATGATTGGTGTCTACATTTCTGTTTTCGCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	cPHA	stamens stamens from open flowers on 18-20 week old plants	6801	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E535449
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P44349 (84 Aa)

PLSPPPPPSPINTASDKEKEKYNHQHHHQQNHHKSNVKLSPPQKLNWGKRLGLMFVGVAAILQVCVVAFLIIKRKQLLKADARF

SignalP predicts non-secretion with a score of 0.089

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P207144 (84 Aa)

PLSPPPPPSPINTASDKEKEKYNHQHHHQQNHHKSNVKLSPPQKLNWGKRLGLMFVGVAAILQVCVVAFLIIKRKQLLKADARF

SignalP predicts non-secretion with a score of 0.089

No InterPro domain matches or not analyzed.

Gene Family (5)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1601	BED_finger Ribonuclease_P	12
2	30197	Gram_pos_anchor Cons_hypoth156	2
5	78665		1
1.1	101536	Protein of unknown function DUF247 plant - Molecular Function: molecular function unknown (GO:0005554)	83
2	126093		2

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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