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Unigene SGN-U212328

Unigene Basic Information

Unigene ID:	SGN-U212328
Unigene Build:	Petunia hybrida #1
Date:	2004-03-30
Organism:	P.hybrida
Alternative ID:	212328
mRNA sequence:	Length: 404 bp

>SGN-U212328 Petunia hybrida #1 (1 members)
TGGTACAGGAACAGTGGAGACAACATCATTTTTGTGCAACGTAAAGTCACCAGGAACTTGCAGCAATGCAACTCAGTATGTGTTTTGGGA
TAGTGTACATCCATCACAAGCTGCTAACCAAGTCCTAGCTGATTCACTCATCATTCAAGGCATCAACCTTATTGGATAATTGGACAAATT
TGTGAAATACTCTTACTACTATCTTCCCCTGAGTTTAATTTATACGCCTTTTAAAGCTACCACGTGTTTTCCTTTTTGTTTTTAAATCCT
TTCCTTTAGTTTTTGGGGTTTCTTGTTTTCTGTTCTTGGGTGATCTTGAAGATGAACATGTTGTCTTGTATTGCTTACTTTTTCTTTTAT
TAATGAATGTACTACTAAGGAAGATTTATAGTGAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Petunia x hybrida	Petunia-C2H4	all floral organs anthesis	3072	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E525084
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|10638955\|emb\|CAB81548.2\|	88.97	1.6e-17	93.33	135 bp (33.4%)	2
Description:	putative proline-rich protein APG isolog [Cicer arietinum]
arabidopsis	blastx	At3g16370.1	82.03	9.7e-17	86.05	129 bp (31.9%)	2
Description:	At3g16370.1 68410.m01868 GDSL-motif lipase/hydrolase protein similar to family II lipases EXL3 …
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P207724 (62 Aa)

FIRLLKLPRVFLFVFKSFPLVFGVSCFLFLGDLEDEHVVLYCLLFLLLMNVLLRKIYSEKKK

SignalP predicts secretion with a score of 0.712

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P44894 (55 Aa)

GTGTVETTSFLCNVKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGINLIG

SignalP predicts non-secretion with a score of 0.079

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	33	Lipase_GDSL	287
2	21983	Lipase_GDSL	280
5	56275	Lipase_GDSL	174
1.1	101406	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	261
2	118422	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	248
5	128942	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	163

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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