Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U583504 and SGN-U589709 in the current build, Tomato 200607 #2

Unigene SGN-U214425

Unigene Basic Information

Unigene ID:	SGN-U214425
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214425
mRNA sequence:	Length: 1075 bp

>SGN-U214425 Lycopersicon Combined #3 (37 members)
TTCAATTACCAACAATATTTTTCAAGAAAAAAAATGGATTCTTCTTCACTAGAAATGATAAGACAACATCTTCTTGATGATGTTGTTTTC
ATGGAAACTTGTTCTTCTTCTTCTTCTTCTTCATTAGAAACAACAAGTAGTACACTTTATTCTCAAACCTCATCGAATTCGGAATCTTTA
GAATCATTAACCTCTGAGATCAAACTTGAAAGCAATTTCTCTGTTTATCCTGATTTCATCAATACACCTCAAAGTTCAAATCTTGAATCT
GTCTCTCGTTTTTTCGATAACTCAACTATTGAATTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAATGATCGAAAACCTTCGTTAAAC
ATTTCGATTCCTTCTGTTAAGAAAACAGAGGAACCAAAAACAGGGGAAGTAAAAACAGGGGAACCAAAAACAGAGGAGCCAAAAACAGGG
GAAGTGAAAACAGAGTACTCTGTTAAGGAGAAAATGGTAGAAAATTCGGAGAAAAAGCGATACAGAGGAGTGAGACAAAGGCCATGGGGG
AAATTTGCAGCGGAGATTCGTGACCCAACTAGAAAGGGGACACGAGTTTGGTTAGGAACATTCGATACTGCAATGGATGCAGCCATGGCA
TATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCTTGAATTTTCCACTTGAGGTAAGCAATTTCAAGCAAGAAAATCATGAG
ATTGAGAAAAATGTTGTGAATTTGAATTCGAATACGAATTCTTGTGGGAAAAGGGTGAGAGGGGAAATGGAGAATGATGACGGAATTGTA
ATGAAGAAAGAGGTGAAAAGAGAACAAATGGTGGCAACTCCATTAACACCTTCAAATTGGTCTTCAATTTGGGATTGTGGAAATGGAAAA
GGTATTTTTGAAGTGCCACCTTTGTCACCATTATCACCACATTCAAATTTTGGTTATTCTCAACTTTTGGTATCATAGTGAAATCCCCAA
AAGAATCCACTTGAGTATGTTATGGAATATTATATAGCGGAACTATACTGCCATCACGATCCACTGAGAATTAGTCTTTTGTTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	9
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	17
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (37)

Alignment image suppressed for unigene with 37 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 3 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	18	TF_ERF	374
2	21982	TF_ERF	296
5	56262	TF_ERF	237

Preceding Unigenes (1)

Unigene	Build
SGN-U144790	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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