Sol Genomics Network

Unigene SGN-U273759

Unigene Basic Information

Unigene ID:	SGN-U273759
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273759
mRNA sequence:	Length: 739 bp

>SGN-U273759 Solanum tuberosum #4 (7 members)
AAAAAATTGAAACTCTCTTGAGTCATTTCTAGGGTTTCATTCCATCGTTCAAATTAGGGTTAAGGTATCCATCAAAGCAAAACCCAAGTA
ATCATGCCGAAGAATAAGGGAAAGGGAGGAAAGAATAGGAAGAGAGGAAAGAACGAAGCTGATGATGAAAAGAGAGAGCTTGTTTTTAAG
GAAGATGGGCAGGAATATGCTCAAGTTCTTCGTATGCTTGGAAATGGACGGTGTGAAGCTATGTGTATTGATGGGACTAAACGTCTTTGT
CACATACGTGGTAAGATGCATAAGAAAGTTTGGATTGCCGCCGGTGATATCGTCCTTGTCGGACTCCGTGATTATCAGGATGACAAGGCT
GATGTTATTCTGAAGTATATGCCAGATGAGGCAAGGTTGTTGAAGGCATATGGGGAGTTGCCAGAGAACACTAGGCTCAATGAGGGTATT
GCTAATTTGGATGAAGAAGATGAGAATGCTGCTGATGATTACATTGAGTTTGAAGACGAAGACATCGACAAAATCTAAAACTCCTTATCT
AAACAGTGCTGTCACTGGGGGTTCCTGTTGGCCTCACAAATATTTCCTTAAGAGTTTGAGTTCAATACAAAAAGAAAGAGAGACCTTATA
TGTACCATTTTAATATGATTGAACTTTGTTCACTAGTATTTCTGTATGAAGATTTATGCTTTGATGAAGCAGATGCAATAATAGCCACCT
GTTCTCTATTCTAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
DQ252515	translation initiation factor eIF-1A	translation initiation factor

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	ACDC	Sprouting Tubers	5177	2
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPC	leaf 6 week old	5062	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1298	TIF_eIF-1A S1_IF1	14
2	24037	TIF_IF1 TIF_eIF-1A S1_IF1	9
5	58095	TIF_IF1 TIF_eIF-1A S1_IF1	9
1.1	102678	Nucleic acid-binding OB-fold subgroup S1 IF1 type - Molecular Function: RNA binding (GO:0003723) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Eukaryotic initiation factor 1A (eIF-1A) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413)	11
2	121031	Eukaryotic initiation factor 1A (eIF-1A) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413) S1 IF1 type - Molecular Function: RNA binding (GO:0003723) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	7
5	131277	Eukaryotic initiation factor 1A (eIF-1A) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413) S1 IF1 type - Molecular Function: RNA binding (GO:0003723) - Molecular Function: translation initiation factor activity (GO:0003743) - Biological Process: translational initiation (GO:0006413) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	7

Preceding Unigenes (1)

Unigene	Build
SGN-U254258	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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