Sol Genomics Network

Unigene SGN-U276500

Unigene Basic Information

Unigene ID:	SGN-U276500
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276500
mRNA sequence:	Length: 1791 bp

>SGN-U276500 Solanum tuberosum #4 (3 members)
AACTTCTTTCAAAGATAGCCACAAATGATGGTCATGGAGAAAATTCAGCTTATTTTGATGGTTGGAAAGCTTATGAAAATGATCCATTTC
ATCCAACACAAAATCCTCATGGTGTTATTCAGATGGGTTTGGCTGAAAATCAGCTTTGTTTTGATTTAATTCAAGAATGGATAGTCAACA
ACCCAAAAGCCTCAATTTGTACCTATGAAGGAGTTCAAGATTTTCAAGATATTGCTATTTTCCAAGACTATCATGGCTTGCCAGAATTTA
GAAAGGCAGTTGCAAGATTCATGGAGAAAGTTAGAGGAGATAGAGTCACATTTGATCCAGAAAGAATAGTTATGAGTGGAGGAGCAACAG
GAGCTCATGAAAGTTTGGCCTTTTGTTTGGCTGATCCTGGTGATGCATTTCTAGTTCCTACACCATATTATCCAGGATTTGATAGAGATT
TGAGGTGGAGAACAGGAGTACAACTTTTTCCTGTTGTTTGTGAGAGTTCTAACAACTTCAAGGTAACAAAAGAAGCCTTAGAAGAAGCAT
ATAAAAAAGCTCAAGAATCAAATATCAAAGTAAAAGGATTACTTATAAACAATCCATCAAATCCATTAGGTACAATTTTGGACAAGGAAA
CATTAAAAGACATACTAAGATTCATCAATGACAAAAACATACATCTAGTATGTGATGAAATCTATGCAGCAACCGCGTTTAGTCAACCTT
CATTCATCAGTATATCAGAAGTCATGAATGAAGTTGTTGGATGCAACGATGATTTAGTACATATAGTGTATAGTCTCTCAAAAGATCTAG
GGTTCCCTGGATTTAGGGTTGGGATTATTTACTCGTACAATGATGTTGTTGTCAATATTGCACGTAAGATGTCAAGTTTTGGACTTGTTT
CAACACAAACACAACGGTTAATTGCTTCCATGCTATCAGACACTATCTTTGTTGAAAATTTCATCGCGAAGAGCGCGATGAAATTGTCAC
AAAGACATGATTTGTTCACTAAAGGATTAGGACAAGTTGGAATTACAACATTGAAGAGTAATGCTGGCCTATTTATTTGGATGGATTTGA
GAAGGTTTCTTGAAAAGTCAACATTTGATAATGAATTGAAACTTTGGCATATAATTATTAATAAAGTGAAACTTAATGTTTCACCTGGTT
GTTCATTTCATTGCTCAGAGCCAGGTTGGTTTAGGGTTTGTTTTGCTAATATGGATGATGCTACAATGCAAGTTGCATTGAAAAGAATTA
GACATTTTGTCTACTTACAACCAAGTAAGGGAGTTGAAGTTGCAACAAAGAAACAATATTGTAGAACAAGGAGCAAACTTGAAATAAGTT
TGTCATTTAGGAGATTGGATGATTTTATGAACTCTCCTCATTCACCTATGTCTTCTCCTATGGTCCAAGCAAGGAATTAATCGTGGCATT
CAGATCAGCTTGTACACACATCATCCAATTCAGGTTATATGGACACGTCGACTATTTTACTGAGTACTTGATTGTAAGTCTAGTTACATA
ACATAGAATGGAAGTTTATAGTGATTCTTTGTATTCTTTTATTAAAAGTTTATTATTTTTTTGCCTATAATATACTATGATTGCAAAAAA
AAAAAGAAAAAAAAGCAATCAAGTTATGGGCTTTTATTATATTGTGAAATGTGAAATTCTTTATTTCTTGTGTTATTTTTTTCTGTATAG
CTTTTTGTAAGTTGAGGAAACTCAATTTGTAACTTGAGTTCAAGAGGCAAATGCAGAGGATATATACCTATCAATTTTTTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
stacs5	1-aminocyclopropane-1-carboxylate synthase 5	1-aminocyclopropane-1-carboxylate synthase

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	vSTmRNA		708	2

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	83	Tyr_amintrans_an Tyr_Nic_amintran Aminotrans_I/II	151
2	22370	ACC_synthase	33
5	56563	ACC_synthase	32
1.1	101453	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769)	139
2	118685	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769) 1-aminocyclopropane-1-carboxylate synthase - Biological Process: biosynthesis (GO:0009058) - Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847)	35
5	129149	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769) 1-aminocyclopropane-1-carboxylate synthase - Biological Process: biosynthesis (GO:0009058) - Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847)	35

Preceding Unigenes (1)

Unigene	Build
SGN-U261132	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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