Sol Genomics Network

Unigene SGN-U276948

Unigene Basic Information

Unigene ID:	SGN-U276948
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276948
mRNA sequence:	Length: 1245 bp

>SGN-U276948 Solanum tuberosum #4 (5 members)
CTTGTTGTTGTGGACGCATGTAAGGTTCCTGCAAAGATAGATGAAGTGTTGGAAGAGGGTGTTGGAGACCTGAAGTATAAAGTACCAACA
TTGTTAGTCTTGAATAAGAAGGACCTAATCAAGCCTGGTGAAATTGCAAAGAGACTTGAGTGGTACGAGAAATTTACAGACGTTGATGAG
GTGATACCCGTAAGTGCGAAGTATGGTCATGGAGTAGAAGATGTCAAAGACTGGATATTATCTAAGCTTCCTCTTGGGCCTGCTTATTAT
CCCAAGGACATTGCCAGTGAGCATCCTGAAAGATTTTTTGTGGCGGAAATTGTCAGAGAGAAGATATTTCTGCAATACCGAAATGAAGTT
CCTTATGCATGCCAGGTTAATGTAGTTAGTTACAAGACTAGACCGAATGCGAAAGACTTCATTCAAGTCGAAGTTATAGTGGAGAGGAAC
ACCCAAAAGATCATCCTTATTGGGAAGGAAGGGAAGGCTTTAAAGCTTCTTGCCACAGCTGCAAGGCTTGACATAGAAGATTTCCTACAA
AAGAAAGTTTTTCTGGAGGTTGAGGTGAAGGTGAAAGAGAATTGGAGGCAAGATGAAGGTCTCCTGAAGGACTACGGCTACGGGGGCCAT
ATTCAAGCTTTGTGATTTGGAAACTCTGTTTTGAACTCTTAATGGATGGAATGTGAATGATGATCAGTAGCTCTTGATGCTCTCCATGAT
GAACTAGCTATAATTTCTATAAATGTTTCCCAAAGTACAGCAGGCTAAGTAGGCAAACGGGATTTTGTGAAAGTTCTTGATGTCAGGATC
AGGTATCACAAATATCCTTGCGGAGAGATCATGATGTAAATGCACCAGATCTCATCTCAGCGCTGCCAATCTCATTTCTGATTAATGTAG
TTGTCCCTTGAGGGATGCCGTTGAAGGGAAGAACTTGACAGAAGATGCAGGTGGCTGCCTGCTCAGCAAGTTAACCTTACACGTTCGTTC
TGTCTTTACTGCTCAACTGTTTAACTAATATCGCAATGTTAAGATGTACTAATTGCTGCTGTGAATTGGAAAAAAGTAGAGAGAGGTGTA
TTGCTTCATTTCTGGCGGGAACTGATTGACATGACTGCAAAACCTGTTTTTGTGCACAAATTATTTTGTAAATTTTTATTTGCAGTAGAG
ATTTTTGTAGGAAGTAGTCTTCAGCTGTCACAGGATTGGTACATTGTCTTTCACATTTCCAAAGTTTTATACAGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	184	MMR_HSR1	78
2	28679	GTP1_OBG Era Cons_hypothATPbd HypB Small_GTP Ras_trnsfrmng ProtSyn_GTPbind MMR_HSR1 GTP-bindding_dom ARF/SAR DUF258 GTP1_OBG_sub ThdF KH	3
5	63192	GTP1_OBG Era Cons_hypothATPbd HypB Small_GTP Ras_trnsfrmng ProtSyn_GTPbind MMR_HSR1 GTP-bindding_dom ARF/SAR DUF258 GTP1_OBG_sub ThdF KH	3
1.1	101549	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	77
2	123943	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein Era - Molecular Function: RNA binding (GO:0003723) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) KH type 2 - Molecular Function: nucleic acid binding (GO:0003676) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	4
5	134105	GTP1/OBG - Molecular Function: GTP binding (GO:0005525) GTP-binding protein Era - Molecular Function: RNA binding (GO:0003723) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622) Small GTP-binding protein domain - Molecular Function: GTP binding (GO:0005525) KH type 2 - Molecular Function: nucleic acid binding (GO:0003676) GTP-binding protein HSR1-related - Molecular Function: GTP binding (GO:0005525) - Cellular Component: intracellular (GO:0005622)	4

Preceding Unigenes (2)

Unigene	Build
SGN-U257076	Solanum tuberosum #3
SGN-U262107	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: