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Unigene SGN-U286663

Unigene Basic Information

Unigene ID:	SGN-U286663
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	286663
mRNA sequence:	Length: 586 bp

>SGN-U286663 Solanum tuberosum #4 (1 members)
TTTCTTCTTGCTTCTTGAAAATAAAAAAAAAATCTCACCTTTTTTGCTCAATTCACTTGTGATTTGTACATTTTTAGTTGTTTTTTTTTT
ATCTCTGCTGCAATGGCAGTAGCAGAGTTTATTCCTTCTTCTTCTTCTTCTTCATTGACTAAAAAAGGCAGTTTTTATTCATCACAACTT
TCTTATGTGTCAACAAAGATCTCTCATCAACGTCCATTAAGCTTTAAGCCTTTATCGAGAACTCATAATTATTCTCAAATATGTTGCTCT
GTTACTTCTAAGGAAGCTCAAGCGCCGACTGTAGTGCACACTGATGATCCAAAGAAGAAATCAGAGTGCTATGGAGTTTTCTGTCTTACT
TATGATCTCAAGGCTGAAGAAGAGACGTCTTCGTGGAAGAAAATGATAACTGTATCTGTGTCTAGTGCTGCTGGGATGATTGCTAATCAT
CTTCTTTTCAAACTTGCATCTGGTGAGGTTTTTGGGCCAAATCAACCTATTGCATTAAGGTTATTGGGGTCTGAGCGGTCAATCCAAACG
CTTGAAGGAGTTGCTATGGAACTAGAGGACTCTCTGTATCCTTTGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E481205
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	122	ldh	108
2	22122	Ferredoxin Mal_dehydrog Mdh_AS ldh	60
5	57562	Mal_dehydrog Mdh_AS ldh	12
1.1	101478	Lactate/malate dehydrogenase - Biological Process: tricarboxylic acid cycle intermediate metabolism (GO:0006100) - Molecular Function: oxidoreductase activity (GO:0016491)	110
2	118552	2Fe-2S Ferredoxin-like fold - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) Ferredoxin - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) Ferredoxin [2Fe-2S] plant - Molecular Function: electron transporter activity (GO:0005489) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118)	56
5	130534	Malate dehydrogenase - Biological Process: malate metabolism (GO:0006108) - Molecular Function: malate dehydrogenase activity (GO:0016615) Malate dehydrogenase NADP-dependent plants and bacteria Lactate/malate dehydrogenase - Biological Process: tricarboxylic acid cycle intermediate metabolism (GO:0006100) - Molecular Function: oxidoreductase activity (GO:0016491) Malate dehydrogenase NAD or NADP - Biological Process: malate metabolism (GO:0006108) - Molecular Function: malate dehydrogenase activity (GO:0016615) Malate dehydrogenase NADP-dependent plants - Biological Process: malate metabolism (GO:0006108) - Molecular Function: malate dehydrogenase (NADP+) activity (GO:0046554) Malate dehydrogenase active site - Biological Process: malate metabolism (GO:0006108) - Molecular Function: malate dehydrogenase activity (GO:0016615)	10

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U258986	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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