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Unigene SGN-U288171

Unigene Basic Information

Unigene ID:	SGN-U288171
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	288171
mRNA sequence:	Length: 608 bp

>SGN-U288171 Solanum tuberosum #4 (1 members)
TTCTTTTTTTAAATTCCAACATCACTTGATTACTTCTGAACTATTGAAGTTAATTTAAAGAGTTAAACAGACTCAAACTCTTAACACTGG
GGTTAGAAATATATGTTACAACTTACAGTCACACTCAGAAAGGGAGCTAAAGGGGGGTATAGGTTGGTAGGACAACAAACATTTCTCATT
CTGCTGCACCAAAAAAGCAATGATCTGTGAGCACTTTGTAACTAAAATCACCTACTCAGTCCTGGATTTTTCACTTCTCCTTAACTAGCT
TCCTCAACATTAGATTGAATACGTGCGGCAATATCGTTCCTCTCTAGCTTAGACACAACGTCTGGTCCACAAAGTAGTATTAACTCTTCC
TTTATCGAATTATTCTCCGAGGTAAGCTTCTCACATTCCTCAGAGAGCCGTTGGAGCTCATCTTTGAGTGAATGATTCTCATGGCTCAAT
GCTTCTACTCTACGTTGTAGCTCTTCACACTCTGCCTGCTTGCGGAGCCTTGACCTCCTAGCTGACTCCCTATTAGATTGCTTTCTCTTT
TGCCTTTTAAGTTCACGTTCCTCCTGAATCCACTGATCATTCATCCTTCCTTCATGTCCTATAACTGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E434906
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	32	TF_bZIP	291
2	22405	TF_bZIP	31
5	57941	Leu_zip_homeo TF_bZIP OGFr_repeat	10
1.1	101428	Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	192
2	118899	G-box binding MFMR Eukaryotic transcription factor DNA-binding bZIP transcription factor bZIP_1 - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983) Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	26
5	131061	G-box binding MFMR Eukaryotic transcription factor DNA-binding bZIP transcription factor bZIP_1 - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983) Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	8

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U260573	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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