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Unigene SGN-U289051

Unigene Basic Information

Unigene ID:	SGN-U289051
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	289051
mRNA sequence:	Length: 392 bp

>SGN-U289051 Solanum tuberosum #4 (1 members)
TGGAGGGATGTCCAAAGAAGCAATTACCATATCTACTCCATATTTATATTCAAGGATATTTCATTGAAAGGATACCTGTTACAAGAAAAG
AATTAGATGAAACACAAATATAGTGTCGATGGATCATTCTATTTGGCCCTCGTTCCGTGCCTGGGATAATGCAATATGAGAATGGAGATG
GTACCTTTTAAAGACTTTCATGTAGCTCTTGAAAAGGCAATGGGGAAACAAGGAAGTCAAAGGAAACAAATTCTAAAATTTTAAAATATG
TTAAGTAATAAATAATTGTAACAATAAGAAAAATATTCTCCCCCAGAGTTTGGGGATATATTTTTCAAGTTGAATTTCGTAATTTCATTT
CTCCCATCATCATTTGATTTTAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E617832
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P231146 (48 Aa)

KIYPQTLGENIFLIVTIIYYLTYFKILEFVSFDFLVSPLPFQELHESL

SignalP predicts non-secretion with a score of 0.308

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P99298 (86 Aa)

GGMSKEAIPYLLHIYIQGYFIERIPVTRKELDETQISVDGSFYLALVPVPGIMQYENGDGPFKDFHVALEKAMGKQGSQRKQILKF

SignalP predicts non-secretion with a score of 0.106

No InterPro domain matches or not analyzed.

Gene Family (5)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	115	Adh_zn_family	112
2	23294	Tdh Adh_zn_family	14
5	92102		1
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	119732	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	13

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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