Sol Genomics Network

Unigene SGN-U290057

Unigene Basic Information

Unigene ID:	SGN-U290057
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	290057
mRNA sequence:	Length: 1910 bp

>SGN-U290057 Solanum tuberosum #4 (1 members)
TCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAATCATTTCTTGGCCTAAAAACCATATTATAACACCCAAATTTCCT
ACTACAGTATTTTAGGTAAAGATTTTATGAAATCTTTTAGTAGTAGAGTATAGTTTTTCAAATTCTCCCACTACACTTGGCTCCAAAGAC
TTTTGGCCCCCTTTGACCCTAAATTTCTAACAAAAAAAAGTCACTTATTGCCCTTTTCTTGACACTCAATCTCTTCTGTTATATAATACA
TCTTTCCTTAAACCATTCTTGCACTTAAAACTCCAAACATCTCACAAAAACACACACTTGAGAAGACAATATGGCACCTGAATTTCAAAA
GAACGCTATGTACGTCTCAAATGAACTCGAAAATGGAGACGTTCAAAAAAACTTTGATGATGATGGACGTGAAAAAAGAACAGGGACTTT
GTTGACTGCTAGTGCACATATTATTACTGCTGTGATTGGTTCAGGAGTACTTTCACTAGCATGGGCTATAGCTCAATTAGGATGGGTGGC
TGGTCCTGCTGTTCTCTTTGCCTTTTCTTTCATCACATATTTCACTTCCACACTTCTTGCCGACTGTTACAGGTCTCCGGGACCGATTTC
CGGCAAGAGAAACTATACTTATATGGACGTTGTCCGCTCTCACTTAGGAGGTGTGAAGGTGACATTGTGTGGAATTGCACAATATGCTAA
CCTTGTTGGAGTTACAATTGGATATACAATTACAGCATCTATTAGTATGGTGGCTGTAAAGAGGTCAAATTGTTTTCACAAAAATGGGCA
TGAAGCAAGTTGCTCAATTGAAAGTTACCCATACATGATAATATTTGCAGTAATTCAAATAGTTCTTAGCCAAATTCCAAATTTCCACAA
GCTCTCATGGTTATCAATTCTTGCTGCTGTTATGTCATTTACTTATGCTTCTATTGGTCTTGGACTATCCATAGCCAAAGCCTCAGGTGT
GGGGCACCATGTGAAGACAGCCCTAACAGGGGTGGTAGTAGGTGTGGATGTATCTGGAACAGAAAAAGTATGGAGAAGTTTCCAAGCTAT
TGGAGATATTGCATTTGCTTATGCTTATTCCACAGTTCTTATTGAAATACAGGACACACTGAAATCATCACCATCAGAAAGCAAGGTAAT
GAAGAGAGCCTCACTAGCTGGAGTTTCCACCACAACTTTATTCTATGTACTTTGTGGTACCATTGGCTATGCAGCCTTTGGAAACAATGC
TCCAGGAAATTTTCTTACTGGATTTGGTTTCTATGAACCTTTTTGGCTAATTGACTTTGCCAACGTCTGCATCGCTGTCCACCTTGTCGG
AGCTTATCAGGTTTTCTGCCAACCATTATATGGATTCGTGGAGGGTCGTTGCAGCGAACGATGGCCAGACAGCAAATTCATAACCTCAGA
ATACGCGATGCAAGTTCCATGGTGTGGCACTTACAACCTCAACTTATTCAGGCTGGTGTGGAGAACAACATATGTTATAGTGACAGCGGT
GATTGCAATGATATTCCCCTTCTTCAACGACTTCTTGGGGTTGATCGGAGCAGCATCGTTCTATCCATTAACCGTTTACTTCCCAATAGA
GATGTACATTGCTCAGAGAAAGATACCAAAGTATTCTTTCACATGGGTATGGCTGAAAATATTGAGTTGGACTTGTTTGATCAGTATCAC
TTGTTGCAGCTGCTGGATCGATCCAGGGACTTGCCACTGATGTTAAGGGTTACAAGCCTTTCTCAACTCATCAATAAGTTTGTTCAAATT
ATTAAATATGTAATGTTATCAATAACAAGTGCAATGCAAGCTGAAATATGGCTGTATGTTATTATTCTTATAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
aap1	Y09825 amino acid transporter

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E624422
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	71	AA/rel_permease2	167
2	22340	AA/rel_permease2	34
5	56543	AA/rel_permease2	33
1.1	101450	Amino acid transporter transmembrane Amino acid/polyamine transporter II - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020)	143
2	118563	Amino acid transporter transmembrane Amino acid/polyamine transporter II - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020)	53
5	129214	Amino acid transporter transmembrane Amino acid/polyamine transporter II - Molecular Function: amino acid-polyamine transporter activity (GO:0005279) - Biological Process: amino acid transport (GO:0006865) - Cellular Component: membrane (GO:0016020)	30

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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