Sol Genomics Network

Unigene SGN-U295150

Unigene Basic Information

Unigene ID:	SGN-U295150
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	295150
mRNA sequence:	Length: 1571 bp

>SGN-U295150 Solanum tuberosum #4 (1 members)
AAAGCATACGATAGCGATCCTTTCCACCCTCTAAAGAACCCAAATGGAGTTATCCAAATGGGACTTGCTGAAAATCAGCTTTGTTTAGAC
TTGATAGAGGATTGGATTAAGAGAAACCCAAAAGCTTCAATTTGTTCCAATGAAGGAATCAAATCATTCAGGGCCATTGCCAACTTTCAA
GATTATCATGGCTTGCCTGAATTCAGAAGAGCGATTGCGAAATTTATGGAGAAAACAAGAGGAGGAAGAGTTAGATTTGATCCAGAAAGA
GTTGTTATGGCTGGTGGTGCCACTGGAGCTAATGAGACAATTATATTTTGTTTGGCTGATCCAGGCGATGCATTTTTAGTACCTTCACCA
TATTACCCAGCATTTAACAGAGATCTAAGATGGAGAACTGGAGTACAACTTCTTCCAATTCACTGTGAGAGCTCCAACAATTTCAAAATT
ACTTCAAAAGCAGTAAAAGAAGCATATGAAAATGCACAAAAATCAAACATCAAAGTAAGAGGTTTGATTTTGACCAATCCATCAAATCCA
TTGGGTACCACTTTGGACAAATACACACTGAAAAGTCTCTTGAGTTTCACCAACCAACACAACATCCACCTTGTTTGCGACGAAATCTAC
GCAGCCACGGTCTTCGACACGCCTCAATTCGTCAGCATAGCTGAAGTCCTCGATGAAAAGGAAATGACTTATTGCAACAAAGATTTAGTT
CACATCGTCTATAGTCTTTCAAAAGACATGGGGTTACCAGGATTTAGAATCGGAATCGTATATTCTTTTAACGATGACGTCGTTAATTGC
GCTAGAAAAATGTCGAGTTTCGGTTTAGTGTCAACTCAAACGCAATATTTTTTAGCCGCTATGCTATCGGACGAAAAATTCGTCGATAAT
TTTCTGACAGAAAGTGCGATAAGGTTAGCTAAAAGACACAAACATTTTACCAATGGACTCGAAGAAGTGGGAATTAAATGCTTGAAAAAT
AATGCGGGGCTTTTTTGTTGGATGGATTTGCGTCCGCTTTTAAGGGAATCGACTTTCGATAGTGAAATGTCGTTATGGAGAGTTATTATA
AACGACGTAAAGCTCAACGTCTCGCCTGGATCATCGTTTGAATGTCAAGAGCCAGGGTGGTTCCGAGTTTGTTTTGCGAATATGGATGAT
GGAACGGTGGATATCGCGCTAGCGCGGATTCGGAGGTTTGTACGTGTTGAGAAAAGTGGAGATGAATCGAGCGCGATGGAAAAGAAGCAA
CAATGGAAGAAGAATAATTTAAGACTTAGTTTTTCGAAAAGAATGTATGATGAAAGTGTTTTGTCACCACTTTCGTCTCCTATTCCACCC
TCACCACTAGTTCGATAGGACTTAATTAAAAGGGAAGAATTTAATTTATGTTTTTTTATATTTGAAAAATATTTGTAAGAATAAGATTAT
AGAAGGAAATCTAGGAGGAGTATTTTCAGAAATAGTTGTTAGCGTATGTATTGACAACTGATCTATGTACTTTGACATCATAATTTGTCT
ATCTAATTAATTAATGAAATGTAAAAGTAAAGTTATGTTAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
accsyn	1-aminocyclopropane-1-carboxylate synthase	1-aminocyclopropane-1-carboxylate synthase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E624581
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	83	Tyr_amintrans_an Tyr_Nic_amintran Aminotrans_I/II	151
2	22370	ACC_synthase	33
5	56563	ACC_synthase	32
1.1	101453	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769)	139
2	118685	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769) 1-aminocyclopropane-1-carboxylate synthase - Biological Process: biosynthesis (GO:0009058) - Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847)	35
5	129149	Aminotransferase class I and II - Biological Process: biosynthesis (GO:0009058) - Molecular Function: transferase activity transferring nitrogenous groups (GO:0016769) 1-aminocyclopropane-1-carboxylate synthase - Biological Process: biosynthesis (GO:0009058) - Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847)	35

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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