Sol Genomics Network

Unigene SGN-U296095

Unigene Basic Information

Unigene ID:	SGN-U296095
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	296095
mRNA sequence:	Length: 469 bp

>SGN-U296095 Solanum tuberosum #4 (1 members)
TTCCCATCCATTATTTTTCCAACATGAATAGTTCCTTCAATTCCCAAAACTTGCAAAAATACTCAAAACACAACAAAAAAAGGCTAAATC
AAGAACAAGTTAGGCTTTTAGAGGCGAGTTTCGATTCAACTAAAAAACTCGATCTAGAGAAAAAACTTCAATTGGCAAGAGAATTAGGGG
TTCCACCACGACAAATTTCGATTTGGTACCAAAATAGGAGAGCGCGATGGAAAAATCAGTGCATGGAAAATGACTACAATGCCCTTCAAG
TTAAGCTTGAAAATGCATTATCTGAGAAAAGGCAACTTGAAAAAGAAACTGAAATTCTTCAAGGAGAATTGGAAAAAGCAAATGAAATGT
TAATTGGACTGAAGGTCAGGGTGCACAAGGGGCAACATTAGGGAAATTTAGAACTATCTAGTTTCATGTTGTGAAAGATGTGATTAGTAT
AGTACTAAAATGGGTACTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STOL	Stolon	6462	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E570094
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	60	Homeobox	203
2	22115	Homeobox HTH_lambrepressr	61
5	56716	Homeobox HTH_lambrepressr	24
1.1	101432	Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Homeodomain-like	183
2	118482	Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeodomain-like	93
5	129915	Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Helix-turn-helix motif lambda-like repressor - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeodomain-like	14

Preceding Unigenes (1)

Unigene	Build
SGN-U267710	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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