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Unigene SGN-U298248

Unigene Basic Information

Unigene ID:	SGN-U298248
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	298248
mRNA sequence:	Length: 441 bp

>SGN-U298248 Solanum tuberosum #4 (1 members)
CCTCATTCGCACACACAGTTACTGAATAGCTGGCGTGGTGCCAAATTATTTGGCGTGTGTCTCATCTCAATCTCGGCTCGGTGCTTGCCT
CTTTACAAGACCTGTAAGAAGGAAAAAAAAGCTATCATAGACACCCATTACTCCAGCTGAGATTACTACTCCCACTCCACCCGCTCCTCA
AAATTTTGAACCCATTCTTTTCTCCTTATTCCANGAACCTGGTGAAGGTGCCAGAGCCCCTTTCTGTAAAGCAGCAACGCAGTGTTTTTG
GATGGATGCTAAAAGAGAAAGAGGANTGGTCAAACCTCAAAACGAGAGGAGAAGAAGATTATCAATGAAGAAAATGCTCTACTGAAGCAG
TTCATACGAGCAGATTACCCCTGAGATCTGATGTAACGTAATGTTCTTGATTCAAATTTCTTAGCTGTTACCATCAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E621899
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P240568 (76 Aa)

EGKKSYHRHPLLQLRLLLPLHPLLKILNPFFSPYSXNLVKVPEPLSVKQQRSVFGWMLKEKEXWSNLKTRGEEDYQ

SignalP predicts non-secretion with a score of 0.345

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P96111 (129 Aa)

SFAHTVTEXAGVVPNYLACVSSQSRLGALPLYKTCKKEKKAIKTPITPAEITTPTPPAPQNFEPILFSLFXEPGEGARAPFCKAATQCFW
MDAKRERGXVKPQNXEEKKIINEENALLKQFNEQITPEI

SignalP predicts non-secretion with a score of 0.108

No InterPro domain matches or not analyzed.

Gene Family (3)

Family Build (I value*)	Family ID	# Members
1.2	2577	7
2	53685	1
5	96196	1

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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