Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U565744 and SGN-U565750 in the current build, Tomato 200607 #2

Unigene SGN-U314059

Unigene Basic Information

Unigene ID:	SGN-U314059
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	314059
mRNA sequence:	Length: 2240 bp

>SGN-U314059 Tomato 200607 #1 (12 members)
AATGAAGCAGCTATGAGAAATGATGTCAAAGCTATTGTTCTGACTGGATATGGTGGGCGGTTTTCTGGTGGTTTTGACATCAATGTTTTC
GAAAAGGTTCATAAAACAGATGATGTTTCTCTATTGCCTGATGTTTCTGTTGATCTCGTGACGAACATTATGGAAGATGGAAAGAAGCCT
GCAGTGGCTGTTGTGGAAGGACTTTGTCTTGGAGGTGGCTTGGAATTGGCATTGGGATGCCATGCACGCATTGCTGCGCCAAGAACACAA
CTTGGGTTGCCAGAGCTTAGCCTTGGAGTTCTTCCTGGCTCTGGAGGTACACAACGACTTCCAAGGCTTATAGGGTTGTCAAAGGCTATT
GATATGATGATGACATCCAAACCAATAATGTCAGAAGAGGGGGAGAAGCTAGGTCTTATTGATGCAGTTGTCCCTTCCAAAGAGTTGTTA
AAAGTAGCTAGACAGTGGGCCCTTGATATTGCAGAAAGGCGCAAACCTTGGATGCGTGCCCTTCACAGGACTGACAAAATTGGTTCCCTT
TCAGAAGCACATGAAGTTCTGAAGTTGGCTAGGAAACAAGTGAAGCAAACTGCTCGGAATATGCCTCAGCACTTGGCATGCCTTGATGTA
ATTGAAGAAGGCATAGTCCATGGTGGATATAATGGGATTCTCAAGGAAGCTAAAGTTTTTGAGGACCTTGTATTATCAGATACATCAAGA
GGTCTTGTTCACGTATTTTTTGCCCAACGGGCTACATCAAAGGTACCTAATGTAACTGATATTGGTCTGAAACCAAGGTCAGTGAAGAAA
GTTGCCATAATAGGTGGAGGTTTAATGGGTTCAGGCATAGCAACCTCTCTTGTTCTGAGCAACATATTTGTTATTATCAAGGAAATTAAT
CCTGAGTATCTTCAGAAGGGGATAAAAACAGTTGAAGCAAATATCCGAGGTTTGGTAGCGAGAAAGAAGTTGCAGCAGGACAAAGCAAAC
AAAGCTTTGTCAATGGTTAAAGGTGTACTGGATTACTCAGAATTTAAGGATGTGGATATGGTCATTGAGGCTGTCATTGAAAATGTTCCT
CTAAAACAACAAATCTTCATTGATATTGAGAAGATTTGTCCTCCCCACTGTATTTTGGCATCCAATACATCTACTATCGACCTCAACATA
ATCGGGCAAAAGACGAGCTCTCAAGATCGGATTATAGGAGCACACTTTTTCAGTCCTGCTCATGTGATGCCTCTGCTAGAGATAATCCGG
ACGGAGAAGACATCTGCCCAAGCAATCCTCGATCTCATGGCTGTTGGCAAAACAATAAAGAAAGTACCTGTTGTAGTGGGAAACTGTACG
GGTTTTGCTGTCAATAGGACATTCTTTCCATATGCCCAGAGTGCACAGTTTCTCGCGAATCTTGGAGTGGATGTCTACAGGATTGATGCA
CAAATCATTAACTTTGGTCTCCCCATCGGTCCATTCCAGCTTCAGGATTTAGCTGGATATGGAGTTGCTATTGCAACAGGGAAAGAGTAT
AGTTCGGCTTTTCCTGATAGAGTATTTATGTCTCCACTGCTTGACCTTCTAATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGA
TACTACATTTACAAAAAGGGAGAGAAGCCAAGACCTGATCCTTCAGTTCTTCCAATTATTGAGGAGTCCAGAAGGCTCACTAATATTATG
CCTGGAGGAAAGCCAATATCTATCACTGATCAAGAAATTGTTGAGATGATACTCTTTCCAGTTGTGAACGAGGCATGCCGTGTTTTGGAT
GAGGGGGTAGTAGTCCGAGCATCAGACCTTGATGTCGCTTCTGTACTTGGAATGAGTTTCCCATCTTACAGAGGTGGCATTGTTTTCTGG
GGAGATACTGTTGGGGCTGGTCATATATATAAAAGTCTCCGCAAGTGGTCAGAAGTATATGGTAATTTCTTCAAGCCATCAAAGTTCTTG
GAAGAGAGAGCAGCAAAGGGCATTCCCTTGAGCGCTCCTGCTGCTACATCTTCGACATCAAGGTCACGCATGTAGTAAGCAATACATTTA
CGACTTCAGCACCTACTTTGATCTGTTCATCATTATGGTTCATAATATGTTTTAATGGTTACATGTAACATGCATAATGTTACTTCTTTT
GGTCAGGGTGGGAACTGTTTGTAGACTTAAACAGATTGCTTAATTTTTATTTGAATAATGTTGGAAAAACAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101506	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	95
2	118736	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	33
5	129297	3-hydroxyacyl-CoA dehydrogenase NAD-binding - Biological Process: fatty acid metabolism (GO:0006631) - Molecular Function: oxidoreductase activity (GO:0016491) Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152) 6-phosphogluconate dehydrogenase C-terminal-like 3-hydroxyacyl-CoA dehydrogenase - Biological Process: fatty acid metabolism (GO:0006631) - Molecular Function: oxidoreductase activity (GO:0016491) 3-hydroxyacyl-CoA dehydrogenase C-terminal - Biological Process: fatty acid metabolism (GO:0006631) - Molecular Function: oxidoreductase activity (GO:0016491)	27

Preceding Unigenes (3)

Unigene	Build
SGN-U214895	Lycopersicon Combined #3
SGN-U224503	Lycopersicon Combined #3
SGN-U236665	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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