Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567492 in the current build, Tomato 200607 #2

Unigene SGN-U317436

Unigene Basic Information

Unigene ID:	SGN-U317436
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317436
mRNA sequence:	Length: 1304 bp

>SGN-U317436 Tomato 200607 #1 (6 members)
CATTATCAGAGCTATGCAGGTGATATATGTAAATAGATTCTCTCCCACTTCAAGGAAGCACGCTATAAATGAAATAAAGGATCTGAAAAC
AGAGAAAGGCTTCTTGCGATCAATTTCCCCGAGTGCTTTTATTTCCTGAAGGGACTACAACCAATGGAAGATCAATTATTTCCTTTCAAC
TTGGTGCATTTATCCCAGGATATCCCATCCAGCCTGTTATTGTGCGGTATCCCCACGTACATTTTGATCAGTCATGGGGGAATGTTTCCC
TAGCAATGCTGATGTTTAGAATGTTCACGCAGTTCCACAACTTCATGGAGGTTGAGTACCTTCCTGTTATTACACCTCATGAAAATCGGA
AGGAAAGTGCTGCCCGACTCGCTCAAAGGACTGGACATGCTGTTGCAACTGCCCTTAATGTGGTACAAACATCTCATTCATATGGCGATG
TGTTGCTTCTTTCAAAAGCATTGGAGGCCAATCAGGAAAATCCTTCACTCTATTTGGTTGAGATGGCAGGGATTGAAGCGGAATTTCATT
TGAGCTCTTTGGAGGCTGTAGATTTTCTGGATGTTTTCCTTTCAATGAACCCAGACTCCAGGGGACAGGTCGAGATTCATCACTTCCTCA
AGGTCTTAAGACTGAAACCCTCTACTCTTTCTGAAAAGATATTTGGCTTCATTGACGTGCAGAAAAGCGGTAAAATAACATTCAAGCAGT
TTTTGGTAGGGTCAGCTCATGTCTTGAAGCAGCCATTATTTTATCAAGCCTGTGAATCAGCCTTTACTGCATGTGATGGTGATGGGAAGA
ACTGCATTCTGGAGAAAGAGTTTGGGGATTCTCTTATGCTATCGATTCCTGGCTTGAGTAACAATGAGATGGGTGAACTCTTCACCTTAT
TTGATATAGATTGCGATGGGAAGATCAGCAAGGACGATTTCATCGGCTGTTTAAGAAGATATCCGTTGTTGATTGCCCTTTTCTCACCAT
GTGTTTTGCAACAAATTTGCCCATAGCTTGAGAAGTGAACTAGGTTGATGGGCTTAGGCACCATCAATTGGTGGAGAACCCTTATTGGCC
TTCTACCACAGATGTGTCTAAGAAATTTTGTTGCTTAGATAGTGTGTTTTATCCTTACAACAAACATGACTTGGGTGTTATTAATGTCCC
ATTTTGAATAGTAAAGTTGTTTGGCCAATATATGTAATGTCTTGATTCTTCTTTTATTTCCAAGTTTTTGTTCAATTTCTCAAAGGGAGA
TGAAAGTAAAATCTAGGCTTCTATATTAAGTTGTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum lycopersicum	LE08	Fruit 8 days post anthesis	339	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101893	Phospholipid/glycerol acyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: acyltransferase activity (GO:0008415)	30
2	121673	Phospholipid/glycerol acyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: acyltransferase activity (GO:0008415) Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	6
5	133567	Phospholipid/glycerol acyltransferase - Biological Process: metabolism (GO:0008152) - Molecular Function: acyltransferase activity (GO:0008415) Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	4

Preceding Unigenes (2)

Unigene	Build
SGN-U216152	Lycopersicon Combined #3
SGN-U236062	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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