Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575022 in the current build, Tomato 200607 #2

Unigene SGN-U320563

Unigene Basic Information

Unigene ID:	SGN-U320563
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320563
mRNA sequence:	Length: 1382 bp

>SGN-U320563 Tomato 200607 #1 (11 members)
AAACCAAAACAAAAAAAAAAAAGTTTATTACAATTTTATTAAAATGGTTGTGCCAATTGTTGGTGAACATGAGACTGAAATTCTTCATGC
TCAAACTCACATATGGAACCATATATTTAGTTTCATAAATTCCATGTCACTCAAATCAGCAATTCAATTAAACATCCCAGACATAATCCA
CAAACATGGCAAACCTATGACACTTGATGAATTAGCCAATGCCCTATCAATCAACCACTCCAAAATCACTCACCTTCGACGTCTCATGCG
AATTTTGGTCCACTCAGGATTTTTCCTCAAGTCAGTATCAGGATCAGGGTCAGAATCAGGGTCAGGAGAGGGGGGCTACGTCCTGGCCCC
TCCAGCTCTTCTTTTATTGAAAGACGAGCCGTTAACAGTTACACCTTTTTTACTAGCAATGTTGGATCCAATTTTAGTAAAGCCATGGCA
TCATGTAAGTGAGTGGTTTACTAGTGATGAGCCAACAGCATTTGAGGTTGCACATGGGAGAACATTTTGGGATTATGCTGGACATGAACC
TAGGTTGAATCATTTTTTCAATGATGCAATGGCTAGTGATGCTAAGTTGGTTATGAGTGTTGTGATGAAATACTCAAAAGATGTTTTTGA
AGGATTAAATTCTATTGTTGATGTTGGTGGTGGTACTGGGACTGTGGCTAAAACAATTGCTAAAACTTTTCCTAATTTGCAATGTACTGT
GTTTGATTTGCCTCATGTAGTTGAAGGACTTGAAGGAAGTGATAACTTGACTTATGTTGGTGGGGATTTCTTTGTGTCCATTCCTCATGC
TGAGGCTCTTCTACTCAAGTGGATATTACATGATTGGAGTGACGAAGAAAGTGTGAAAATACTAAAGAAATGTAAAGAAGCGATACCCAG
CAAGGAAAAAGGTGGAAAGGTGATAATTATTGACATGATGGTTGATAATAAAATTGGAGATGATGAATCAATTGAAACTCAAATTTTCTT
TGATATGTTAATGATGGTTTTGGTTACTGGAAGAGAGAGATCTGAAAGAGGATGGGCTAAAATCTTTTCTGAGGCTGGATTTAGTGACTA
TAAAGTTACTCCAATTCTTGGATTAAGGTCACTAATTGAGGTTTATCCTTAATTAATTTGAGTTTGTGATAAAATAATTGATCCTCATGA
GTGTGCATTTATTTTTTTTTATCACATGGTGTGTCATGTAATTGATATGAAATAATGAGGGGTTATGTGTTTGATTGATGTACTTTTTTA
TTTTCTTTGAATGGAAATTGAACTACTTTTAATTTCTTATGTATTGCTTGCTTCATTTTTATTTTTTGGATTCGATAAAGGAATAAATTT
GTAAATATCGCAGACAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101588	O-methyltransferase family 2 - Molecular Function: O-methyltransferase activity (GO:0008171)	67
2	118529	O-methyltransferase family 2 - Molecular Function: O-methyltransferase activity (GO:0008171)	64
5	129496	O-methyltransferase family 2 - Molecular Function: O-methyltransferase activity (GO:0008171) SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) Dimerisation Winged helix repressor DNA-binding Generic methyltransferase - Molecular Function: methyltransferase activity (GO:0008168)	20

Preceding Unigenes (1)

Unigene	Build
SGN-U218242	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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