Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U568110 and SGN-U568111 in the current build, Tomato 200607 #2

Unigene SGN-U320818

Unigene Basic Information

Unigene ID:	SGN-U320818
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320818
mRNA sequence:	Length: 2187 bp

>SGN-U320818 Tomato 200607 #1 (8 members)
TGACACTTTGCGCATTTTAACACGTTTTCCACCTCTAACCACACACACCAAACAATTCTTCCTTCTTTCTCCTGTTTTCATATACAGATC
ACCATAATCCTTTCTTCATATTTTCCCCCTTACTAAACCCTTTTCCTCTTCCTCTCTAATAAGGTTTTTTTGTTTGTTTCTTTTCCCTTA
ACCTTTTCATACTTCATCTTCCTGAATTCCAATTGAACATTTGTGCATGGAATTTGGGTATATTGAAAGGCAACAATTGGTTGATCCTCG
ACATGTGTATACATATCTACCCAGATGGTCAATTGGGTTGCGTCCAAACTTGAATCTTGATTATCAGGTACCCCATCCTGGTGGGGTTTT
GGGTTTTGGGGGAAACCAAGATGCGATTCTACGAATGGAAATGGAAAGGTCAATGTCACTCTTTCAGATTATGGGCGCTGAAGGGTTAGT
GCCTTCGCTAGAGGAGGAAATGAAGAGGAGAAATGCTATTCACAAGCTCAAAAAGATAGTGAGGGAATGGGTCCAGACAGTGTCTTACCA
TCACGCTCTTCCAGAAAGATACCTCAGGTTTGCCTCTGGCACAATATTGACATATGGATCATATGGTCTAGGAGTTCATAATTCGGAGTC
TGATATTGATGCATTATGTGTTGGACCGTGCTTTGCAACAATAGAAGAAGACTTTTTCATTGTTCTGCGCAACATTCTCGCGAGCAGACC
AGAAGTATCAGGTATTCACTGTGTCAAAGGTGCGAAGGTTCCTCTGATGAGATTCAAATTTGAAGGGATCTCTATTGATCTTCCATATGC
ACGACTAAAAGTAATATCCATACCTGAGGATGTGGATGTATTCAATCCGTTCTTCTTGAAGAATATTGATGACAAGAGTTGGAAAAGTCT
GTCTGGTGTTCGTGCAAATAGGAGAATTCTTCAACTTGTGCCAAATGTAGAGATATTTCAGGCAGTTCTGCGTTGTGTTAAACTATGGGC
AAAGAAACGAGGAGTTTATGGGAATTTGCTTGGATTCTTTGGAGGAGTTCATCTAGCAGTGCTTTCAGCATTCATCTGTCAAAGGCATCC
AACAGCCAGCTTGAGTGCACTTTTTTTTATTTTCTTCAAAACATTTGCCTTTGGCCTTGGCCGACTCCAGTAATTTTACAAGATGGAGTT
GCTTGGCCATTTATTCCCACGGATAAAGTTTTGTGGATGCCAATCCAGTTACCGTGTAGCCCATATCAATTTTGTCATTCAAACACGGTC
CGAAGTACATTTTTCATAATCAAGAGTGAGTTGCTGAGAGGGCATACACTGACTAAGGATATTTTAAGGCCAGATTTTGATTGGAATAAC
CTGTTTGAGCCCTATCCTTATCCAAGAAAATATGAGAAGTTTGTCAAAATTTTCCTCTCAGCTTCTGATAAAGATGAGCTAGGTGACTGG
GTGGGTTGTGTCAAATCACGCTTTCGCTGCCTAATTATCAAACTGGAGGAGTTGCTGGGGTTTTGTGACCCCAACCCAACAGAGTATGTT
GACGTTGATGCATCCGAGCCCAATCTCGTTTTTTATTGGGGATTGCCTCCTGCTATGACTGATATGATAAATATAGGTCACGTGGAGGTA
GAGTTCTTGAAGAGTGCGAACAATGTATATCAAGGCCCAACTGGGAAGCTGAAGTTATCAATTGTGCAAGCTGATCAGTTACCTTAAAAG
GCCCACTTTAATAGTGAGCTCCAGAGTGCAAAGCCTTGTTGGAGGTTGTGGGGAGCAATCCGTGAATAGTTCCTGTATACTACAAATACC
AACCATCTGTGTTTTTGATGGATATTTGACCACAAATGCACGTCCTGAGTACCCAAATGCTGGGGGTTGAGCTGCTGCCGCCCCTTCTGT
TGTTCAACGCCTCAGTCAGTTTGCTCTTCCACAGAGCGAAAAAGGTTCAACACAGTTTGTATTCGTGGTCAGTACAGAGAAGAATGACAC
GATTGTACATTTTGAGTGTTGTTACTTGTAAATCCTCTCATAGTGTAAATGCTTTTGCTCTTGAAAAACACATTGAAGAAATGAACGCGT
TCTTTTGCGCCAGTCTTGCAGTTGCTGCTTGACGAGCTTGTAGCTTGTACTTGTCAAATTTATGTTAATATAATGTTTAATATAATCTCT
TATTGAAAAAAAAAAAAAAAAAAAATC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101903	Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350)	29
2	119025	Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like	22
5	129472	Poly(A) polymerase RNA-binding region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) Poly(A) polymerase central region - Molecular Function: polynucleotide adenylyltransferase activity (GO:0004652) - Biological Process: transcription (GO:0006350) PAP/25A core - Molecular Function: nucleic acid binding (GO:0003676) Poly(A) polymerase C-terminal-like	20

Preceding Unigenes (3)

Unigene	Build
SGN-U224851	Lycopersicon Combined #3
SGN-U227439	Lycopersicon Combined #3
SGN-U237650	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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