Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U577455, SGN-U580656, SGN-U580712, and SGN-U590367 in the current build, Tomato 200607 #2

Unigene SGN-U320833

Unigene Basic Information

Unigene ID:	SGN-U320833
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320833
mRNA sequence:	Length: 1326 bp

>SGN-U320833 Tomato 200607 #1 (10 members)
AAGAATCTTAAAAATTAAAAAAAAATTAAAAATGGAGCTTCAGGAGAAAAACTCCACCGACTTTACAGAGTTGTTTACAGGAGATATTTC
TTGGTTTGTATGTCGGCGTTACCTATATAAACCTCCCTTCAACCCCTTTTACCGACTTTTTATCTATCACCCTTATCGAAATTTTGAATC
TTTTGATCACAAAAACTATTAAAGTTTCAATCTTTGATCCATAAAAACCACAAATCTCTTTGTATGATATGAACCCATTTGATAAAAAAC
AAGAATCTGATACTGATACAAAAACCCCATTTTTGACTGAAATGGACTCTGAATTTGCTGCGTTTTCACCAATTTCACTCCCTTTTGCTG
ACCCATCTTCTCCTTTTATCAATTTTGGATCTTTTGCCACTCCTTTGAGCCAACATCCAGTTGGAGAAGGGGAAGGAGAAGGAGAAGGGG
GAGAAATTGAACAGCCAGCTGAGGGAGGATTGGGTGTGCCGCAGCCTATGGAGTGTTTACATGGGATACAAATTCCGCCATTTTTGTCAA
AGACTTTTGATTTGGTTGAGGACCCTTTATTGGATACGATTATTTCTTGGGGTAGAAATGGAGAAAGCTTTGTAGTTTGGGATCCAGTGG
AGTTTTCAAGATTGGTTCTTCCTAGGAATTTCAAGCACAGTAATTTCTCCAGCTTTGTTCGACAGCTTAATACATATGTGGGTATTAATT
TTAGCACACTGGCCAACTTTTTCTGGCTAATGTGTTAAATCTCTAGTTCTCTAACTCTGTCTCTCTTTTTAATGATATTTTTTCCTTGTA
TGTAATTTCTGTTGTAGTTTTTCATGTATCTTTATTTTTTCCCTCATTTTTCTGTAGTTTGTTTGCTCTTTTGTTGTTGATATACTGTAA
AGATAATGTCTTAGGATGTAAATGTAAATAGATTTTTCGCGTTGTAAACAGTATAGGCTCCTGCGATTGTAAATGAGAGTTGGAGAACTG
TTTTTTCTTCTTGATAGTTCAATGTTTTTGGCATCTTGTGTAAATGATGTCATTGAGATCTTTAGTGGATAGTAAAATGGTGGGTTCTTA
AGGAAAATGGTAAAGAGGTGCGCTGTTCATGATGTGGGCTTGTAGATAAAGCTCCCTGCATTGATGCATCTGCTGAGTTTGGGAGGTTCA
TCTATTGCTGCAGGTAGAATTCAAAGGTTCTGATTAAACAGAGTGTTTAAGCTTTGTAGTTTATATATGGTCTAACTTCAAAGATCTACT
AATTGTGTATTTCTAGTGTAATGCAGCTCCTGGAACTCATGAAAATTTGANCAGTAGCATCTTGCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101510	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	95
2	118501	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	77
5	129018	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	62

Preceding Unigenes (1)

Unigene	Build
SGN-U219451	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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