Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567329 in the current build, Tomato 200607 #2

Unigene SGN-U322031

Unigene Basic Information

Unigene ID:	SGN-U322031
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322031
mRNA sequence:	Length: 1354 bp

>SGN-U322031 Tomato 200607 #1 (8 members)
GACAACGTCTGTGGTTCGAATCTCATTTTCTGCTTTTTTTTCTTCTTCTTCTTCTTCACGATCATCTTCTGCAATTCTGCTTTAGATCCG
TTAACTCTCATCCGTATTTTGCCCAACCATGGATCCAGATTTACCTCTTTCTTCTTCAAGCACTAGAAAGGTGAAATTCGCTCCCAAAGG
ACCTCCCCGTCGAAAGAAGCAAAATCCTGCACAACCTAAAAATGAAGCAGATGGAAATGAGGATAGGGATGATAATGAAGCTGCTGAAGC
TGTTCTGCGCAAAGTCAATGAGCGCTTGACTAGACAGAAACCTAAAACAGAGAAAAAAGTTGAGGTTGCATTTGCTCATGGAGTAGCATC
ACCAACTTCCACAAAGACTTCTGGGAAGTCTAGGGAACTCACTGTCAATCAGGATAGTACTCTGAAAGACAATGAATCTTGTGATAACAT
GGACATTGATTCTTTACCTACTTTACCTTCAAGTACTGGACCAGATCTTGCTGAAATGTCAGTCAATAATTCAGATTCTTTACTTAAAAG
GAAGAAAGAGTATAAAGAACCTTGGGATTACCATCATAGCAACTATCCTGTAACCCTTCCTCTGAGAAGACCATATGCTGGAGATCCAGA
AATTTTAAATGAAGCTGAATTTGGAGAGGCTGCAAAAAATGCTGAGTATGATGAAAATAATATAAATCCTGCTTCAGAGCTTGGCTTACT
GGAAAAGAAGGATGATGTGCAGCTTCTTTTTCTTCAGCTTCCTGCTAATTTACCGCTAAGCAAGTTGCAAGCTAGCACAGGAGGTAGAGA
TACTGCTGTCAGCTTGACATTGCCAGGGGACAAAAGTGACAAAGCTGCAACATTGTCATCACCTATGCTTAAGGGAAAAGAAGTTGCTGG
CAGTGCTCCCAGATTTCTTGCCAGTGCAAAAGGGAAAGAGATATCTGACAGCTCTACAATCTCCAGACGACATAATAATACTACAAACAA
AGTGTGCAGTTTGCAAGAGTTGCCCGCGGGAAGCATGGGGAAAATGCTGGTTTACAAGAGTGGAGCAATTAAATTGAAGCTTGGAGACAT
TCTATACGATGTTTCTCCTGGTGTAGAATGCTCTTTTTCTCAAGATGTTGTTGCAATCAACACTGCTGAGAAGCAGTGTTGTCAGCTGGG
AGAACTCGGAAAACGGGCTGTTGTCACTCCTGATGTTGATTTCCTCCTGAACAATCTGATGTAGTTGAGCTTAAGGTCACCTTAATTTGT
CAAGTTAGAGCAGGGTTTCTGTTGTTAGGGAAACATTTACTTCAATTTCTAGATTTAGAAGATCTTCTGATTTCCTATAAAAAAAAAAAA
AAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	103615	RNA polymerase III RPC4 - Molecular Function: DNA binding (GO:0003677) - Molecular Function: DNA-directed RNA polymerase activity (GO:0003899) - Cellular Component: DNA-directed RNA polymerase III complex (GO:0005666) - Biological Process: transcription from RNA polymerase III promoter (GO:0006383)	6
2	121812	RNA polymerase III RPC4 - Molecular Function: DNA binding (GO:0003677) - Molecular Function: DNA-directed RNA polymerase activity (GO:0003899) - Cellular Component: DNA-directed RNA polymerase III complex (GO:0005666) - Biological Process: transcription from RNA polymerase III promoter (GO:0006383)	6
5	140122		2

Preceding Unigenes (1)

Unigene	Build
SGN-U221806	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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