Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U582422 in the current build, Tomato 200607 #2

Unigene SGN-U329106

Unigene Basic Information

Unigene ID:	SGN-U329106
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	329106
mRNA sequence:	Length: 1370 bp

>SGN-U329106 Tomato 200607 #1 (3 members)
GGCTCCTGAGCCAGCCATCTTTGATGATGATGAATCTTTGGGTCATCAACTCAATTCTACAGAGAAAAGTGCTTCTGATAAGAGTTCAAT
AGATGGTTGTGAGTCTTGTGACAACAGAAAAGTAAAGATTGAAACTTACCCTGAGGTTCCCGCAGTCTCAAGGTCCAGTGCTTCAGCTAA
CTTTACTGTGTTAGTCCAGCTGAAGGCTCCTGGTTCATTCTCAGTACAAGAACCAGGCAAAACCCAGGTAAATTTGTCTCAGGTTTCCCA
AACGCCTCGTGCTCCTGTTGACCTTGTCACAGTTCTTGACATCAGTGGAAGTATGGCTGGCACCAAACTAGCGTTACTAAAACGAGCTAT
GGGTTTTGTGATACAGAATCTCGGTCCCAATGATAGACTGGCAGTAATTGCCTTCTCTTCGACTGCTCGCCGCCTCTTCCCTCTTCGTAG
GATGTCTGAGACAGGACGGCAGCAAGCACTGCAAGCTGTAAACTCCCTGGTTGCAAATGGAGGGACAAATATTGCTGAAGGCTTGAGAAA
GGGCGCCAAGATAATGGAAGACCGCAAGGAAAAGAACTCGGTTACTAGTATAATACTGTTGTCTGATGGTCAAGACACATACACAGTCAG
TAATAATTCTGGTAGTAGACAGCAGCAACCTAACTACAAGCTGCTTCTACCCTTGTCCATTCATGGTGGAAATAGTTCAGGGTTTAAAAT
ACCAGTACATGCTTTCGGGTTTGGTAATGATCACGATGCTTCGTCAATGCATTCAATATCAGAGATTTCAGGAGGAACATTTTCATTTAT
TGAGACAGAAGGTGTCATACAGGATGCTTTTGCACAGTGCATTGGAGGCCTTCTCAGTGTTGTAGTCAAGGAGCTTCAGGTAAGCATTGA
GTGTCTTCACCCAGGTGTCTGTCTTAGCTCTTTAAAAGCAGGAAGCTATCCAAACCGCTTAATGTCTGATGGACACATGGGAACAATTGA
TGTTGGAGATCTATATGCTGATGAAGAGAGGGATTTTCTGGTTTCAATCAATATCCCTACTGAATCTTCAGGTGCAGAAACATCATTGTT
AAAGGTTAAGTGTGTATATGTGGATCCCTTCACGAAAGAGAAGGTTTCCATCAGAAGTGAAGATCTAAGTATCAAGAGACCTGAAAAGGC
TGGACAAGAGAGTGTTTTGATTGAAGTAGACAGGCAGCAGAACAGGGTCCGAGTGGCCGAGGCAATGGCACAGGCACGAGCTGCTGCTGA
GAAAGGAGACCTAGTTGGCGCGACTTCCATCCTAGAGAACTCCAGAAAGTTGTTGTCAGAGTCACAGTCTGCTAAATCTCATGACCGGCT
TTGTGTTGCACTTGATGCTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101918	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270) von Willebrand factor type A	28
2	119058	von Willebrand factor type A Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	21
5	129860	von Willebrand factor type A Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	14

Preceding Unigenes (1)

Unigene	Build
SGN-U229107	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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